KEGG   Dickeya parazeae: Dd586_2010
Entry
Dd586_2010        CDS       T01138                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
ddc  Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:ddc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddc03009]
    Dd586_2010
Enzymes [BR:ddc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Dd586_2010
Ribosome biogenesis [BR:ddc03009]
 Prokaryotic type
  rRNA helicases
   Dd586_2010
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII Helicase_C_2 CMS1 CAAP1 AAA_22 YlmH_RBD AAA_19 Sas-5-like_implico
Other DBs
NCBI-ProteinID: ACZ76866
UniProt: D2BZV7
Position
2280828..2282201
AA seq 457 aa
MTSFAELNALAAEQLTTLNELGYLSMTPIQAAALPAILAGKDVRAQAKTGSGKTAAFGLG
LLQHLDAGQFKTQSLVLCPTRELADQVANELRRLARGMPNIKVLVLCGGVPFSIQRDSLI
HAPHIIVATPGRLLDHLKKETVSLDALQTLVLDEADRMLDMGFADAIDEVIHHAPAERQT
LLFSATWPEAIAAISRRIQRDPLVIEIDTVDELPAVEQQFYEVSRNGKLDLLQKLLSREQ
PASCVVFCNTKKDCQAVYDALTHSNQSVLALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKALEMVINYELSWDPEVHVHRIGRTARAGEQGLAISLCAPEEAQRANALEEML
KMKLTWHPLPSGLRITPLEAAMATLCIDGGKKAKMRPGDILGALTGDMGLDGADIGKITI
HPMHAYVAVKQSLARQVWKQLQQGKIKGKAVKVRLLK
NT seq 1374 nt   +upstreamnt  +downstreamnt
gtgacctcatttgctgaactgaacgcgcttgctgcggaacaactcaccaccttaaacgaa
ctgggctatctgtccatgaccccgattcaggctgcggcattaccggcgatcctcgccggg
aaagatgtccgcgcgcaggcgaaaaccggcagcggcaaaacggcggctttcgggctgggc
ctgctgcagcatctggatgctgggcagttcaagactcaatcgttggtgctgtgcccaacc
cgcgaactggccgatcaggttgccaatgagttgcgtcgtctggcgcgtggtatgccgaac
atcaaagtgttggtattgtgcggcggtgtaccgtttagcatccagcgtgactcgctgatt
catgctccccatattattgtcgccacgccgggccgactgttggatcacctgaaaaaagag
accgtcagccttgatgcgttgcagacattagtgctggatgaagcggatcgcatgctcgat
atggggtttgccgatgctatcgatgaggtgattcaccacgcaccggccgaacgccagaca
ctgctgttttccgccacctggccggaggcgattgccgccatcagccgtcgtattcaacgt
gatccgttggtcattgaaattgacacggtggatgaattgccggcggtcgagcagcaattc
tatgaggtgtcgcgcaacggcaagctcgatctgctgcaaaagttgctgagccgtgaacag
cccgcgtcgtgcgtggtgttttgtaataccaagaaagattgtcaggcggtatacgatgcg
ctgacccacagtaaccaaagtgtactggcgctgcacggcgacatggagcagcgcgatcgc
gaccagacattggtacgtttcgccaatggcagtagtcgtgtgctggtggcaaccgacgtt
gctgcacgcgggctggatatcaaggcactggaaatggtgattaactacgaactgtcgtgg
gatcctgaagtgcatgttcatcgtattggccgtaccgcccgtgcgggtgaacaggggctt
gccatcagcctgtgcgcgccggaagaagcccagcgagcgaatgcactggaagagatgctg
aagatgaaactgacctggcatccattgcccagtgggttgcgtatcactccgctggaggcc
gcaatggcaacgctgtgtattgatggcggcaaaaaagccaaaatgcgccccggcgatatt
ctgggcgcgctaactggcgacatggggctggatggcgcggatatcggcaagattactatc
cacccgatgcacgcttatgtggccgtcaagcagtcgctggcgcgtcaggtatggaagcaa
ctacaacaaggcaaaattaaagggaaggcggtgaaggtccggttgttaaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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