KEGG   Dickeya parazeae: Dd586_2783
Entry
Dd586_2783        CDS       T01138                                 
Name
(GenBank) tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
ddc  Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:ddc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ddc03016]
    Dd586_2783
Enzymes [BR:ddc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     Dd586_2783
Transfer RNA biogenesis [BR:ddc03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Dd586_2783
SSDB
Motif
Pfam: DAO Methyltransf_30 NAD_binding_9 Pyr_redox_2 NAD_binding_8 Pyr_redox_3 FAD_oxidored FAD_binding_2 Pyr_redox Amino_oxidase HI0933_like GIDA NAD_binding_7 FAD_binding_3
Other DBs
NCBI-ProteinID: ACZ77623
UniProt: D2BS76
Position
3140030..3142057
AA seq 675 aa
MTSPSIQHADLNWNAQGTPVSQQFDDVYFSNQDGLAETRYVFLQGNGFPQRFLENAGQVV
TVAETGFGTGLNFLTLWQAFMQFCQQQPEAVVQRLHFISFEKFPLRQSDLAAAHASWPEL
ASFAEELRQHWPLALPGCHRLILAQGRITLDLWFGDVNTLLPTLDHSLTRRVDAWFLDGF
APAKNPDMWTDALFSAMARLCRTGGTFATFTAAGFVRRGLQQAGFQVSKIKGFGQKREML
CGTVSHSTEPLHPAPWYERPAATNPQDVAIVGGGIAAVLTALALLRRGARVTLYCADDQV
GLRASGNRQGALYPLLNDKQDALSGFFAAAFGFARRCYDNLAAQGVAFEHDWCGVSQLAY
DEKSTRKITQILAGNWPDTLVRPVDAHHLTEQAGVALHTHGITYPQGGWLCPSELTESAC
AMACRQGLQVHLSTGVTALTPTDNGWQLTLADGRRVQHATVVLANGHQINDWEQTQHLPV
YAVRGQVSHIPDTLALSALRQVLCYDGYLTPVSPHHQTHCIGASYHRGDTDIDYRETDQQ
QNRQRLIDCLPDCDWPTSIDISGQQARCGVRCAIRDHLPLLGQVPDYHQTLADYQNLPGQ
LAAGSAVKTAPSWPNLYLIGALGSRGLCSAPLAAEILASQLFGEPLPLASDTLAALHPNR
FWVRKLLKGRSPHTR
NT seq 2028 nt   +upstreamnt  +downstreamnt
gtgacaagcccttccatccagcatgcggaccttaactggaacgctcagggtacacctgta
tcgcaacaatttgatgacgtctatttttccaaccaggacggtctggcggaaacccgctat
gtctttttacagggcaatgggtttccacagcgtttcctggaaaacgcaggccaggtcgtt
accgtggcggaaacaggtttcggtacggggttaaatttcctgacgttgtggcaggcattc
atgcaattttgccagcaacagccggaggccgtagtacaacgcctgcacttcatcagcttc
gagaaatttccgctacgccagtcggaccttgccgccgcgcacgccagttggccggaactg
gcgtctttcgccgaggaattacgccagcactggccactggcgctgcccggctgccaccgg
ctgattctggcgcaggggcgcatcacgctggatttgtggttcggtgatgtcaacacacta
ctgccgacgctggaccacagcctgacacgccgtgtcgacgcctggtttttggatggtttt
gcaccggccaaaaacccggacatgtggaccgatgcgttgtttagcgcaatggcgcgtctg
tgccgaacgggaggaaccttcgccaccttcaccgccgccggttttgttcgccggggtctg
caacaggccggttttcaggtcagtaaaataaaaggattcgggcagaagcgggaaatgctg
tgcggcaccgtgtcacacagtactgaaccgttacaccctgcgccctggtacgaacgccca
gcggccaccaacccgcaggacgtggccattgtcggcggtggcattgccgccgtactcacc
gcgctcgccctgctgcgacgaggcgcacgggtcacactgtattgcgccgacgatcaggta
gggctacgcgcctccggcaatcgccagggagcactctatccgctgttgaacgacaagcag
gatgccttgtcagggttcttcgccgctgcgttcggcttcgcccgtcgctgctatgacaac
ctcgcggcacaaggcgtggcgtttgaacatgactggtgtggcgtcagccaactggcctac
gatgaaaaaagcacgcgtaagataacacagattctggcaggcaactggcccgatacgttg
gtgcgaccggtcgatgcccaccatctgaccgagcaggcgggtgtcgcattgcacacccac
ggtatcacctacccacaaggcggctggctatgcccgtccgaactgacggagtccgcctgc
gcgatggcttgtcggcagggacttcaggttcatttatcgaccggcgtaacggcactcacg
cctactgacaacggctggcagttaacgctggcagacgggcgtcgggtgcaacatgccacg
gtagtactggcaaacggtcatcagataaacgactgggaacaaacgcagcacctgcccgtc
tacgcggttcgtggtcaggtcagccacattcctgataccctggcgctgtctgcgttgcgt
caggtgctgtgttatgacggttacctgacgccggttagcccgcaccaccagacacactgt
atcggtgccagttatcaccgtggtgacacggatatcgactaccgcgaaaccgatcaacag
cagaatcgccagcggctgattgactgcctgcctgactgtgactggccgacgtcgatagac
atctccgggcaacaggcacgatgtggcgtgcgctgcgccatccgtgatcatctgccactg
ctcggtcaggtgccggattatcatcaaacgttggcggactatcagaacctgccgggacag
cttgctgctggctctgcggtgaaaacggcgccatcctggccgaatctctatctgattggc
gcattagggtcgcgcggcttatgctcagcaccgttagcagccgagatcctggcctcgcaa
ctgtttggcgaaccgttgccgctggcaagtgatacgctggcggcgctgcaccccaatcgt
ttctgggtgagaaaattactcaaaggcagaagcccacacacccgttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (34)   

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