KEGG   Dickeya dadantii 3937: Dda3937_00589
Entry
Dda3937_00589     CDS       T01305                                 
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ddd  Dickeya dadantii 3937
Pathway
ddd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ddd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Dda3937_00589 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ddd03400]
    Dda3937_00589 (nth)
Enzymes [BR:ddd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Dda3937_00589 (nth)
DNA repair and recombination proteins [BR:ddd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Dda3937_00589 (nth)
 Prokaryotic type
     Dda3937_00589 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: ADM98446
UniProt: E0SBX8
Position
complement(2374162..2374797)
AA seq 211 aa
MNKEKRIAILSRLRDNNPHPTTELKFSSPFELLISVLLSAQATDVSVNKATEKLYPVANT
PQGMLDLGVDGVKSYIKTIGLFNGKAENIIKTCRILLDQHQGQVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTHFAPGKTVEQVEEKLLKYVPAEFKVDCHHWLI
LHGRYTCVARKPRCGACLIEDLCEYKEKVDI
NT seq 636 nt   +upstreamnt  +downstreamnt
atgaacaaagagaaacggattgccattcttagccgcctgcgagacaacaacccgcatcca
accaccgaactgaaattcagttcgccgtttgagctgctcatttcggtgctgctgtccgcg
caggccaccgacgtcagcgttaacaaagccacggaaaagctctatccggtggcgaatacg
ccgcaggggatgctggatttaggcgtagacggcgtgaagtcgtatatcaagaccatcggg
ctgttcaacggcaaggctgaaaacatcatcaaaacctgccgcattctgctggatcaacat
cagggccaggtgccggaagatcgcgcagcgctggaagccctgcccggcgtcgggcgtaaa
accgccaacgtggtgctgaataccgcctttggctggcccaccatcgcggtggatacccat
atctttcgcgtctgtaatcgaacccactttgcaccgggaaaaaccgtcgagcaggtggaa
gaaaaattactgaaatacgtcccggcggaattcaaggtcgactgtcaccactggctgatc
ctgcacggccgttatacctgcgtcgctcgtaagccgcgctgcggcgcctgcctgatagaa
gacttgtgcgaatataaggaaaaggtcgacatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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