KEGG   Dickeya dadantii 3937: Dda3937_02483
Entry
Dda3937_02483     CDS       T01305                                 
Symbol
mrdA
Name
(GenBank) peptidoglycan synthetase, penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
ddd  Dickeya dadantii 3937
Pathway
ddd00550  Peptidoglycan biosynthesis
ddd01100  Metabolic pathways
ddd01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:ddd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Dda3937_02483 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Dda3937_02483 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ddd01011]
    Dda3937_02483 (mrdA)
Enzymes [BR:ddd01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Dda3937_02483 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:ddd01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   Dda3937_02483 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer NUFIP1
Other DBs
NCBI-ProteinID: ADM97503
UniProt: E0SEU1
Position
complement(1384039..1385949)
AA seq 636 aa
MNIERKPFRDYTAEAALFVRRALVAFLGILLLSGILVANLYHLQVSRFDDYRTRSNENRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELIPEKVNNLEETLQALKSIIDLTDEDIDNF
RKERKRSRRFTSIPVKTGLNEVQVASFAVNQYRFPGVEVKGYQRRYYPYGAALTHVIGYV
SKINDKDLERLDQEGKLPDYAATHDIGKLGIERYYEDVLHGKPGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTLDLNLQLYIEKLLAGSRAAVVVTDPKDASILAMVSTPSYDPNLFVD
GISSKTYHALLNDPNRPLINRATQGVYPPASTVKPYIAVSALSANVITPYTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNLTKSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHRTGI
DLSDKEESPGIMPTREWKMKRYKKPWYQGDTIPVGIGQGYWTATPIQMLKALTTLINDGQ
VKAPHLLSSTQENNTQVPYRQQEHQQIGDIRSGYWEIVKDGMYGVANRQNGTAHKFFADA
PYKIAAKSGTAQVFGLKENETYNANRIAERLRDHKLMTAFAPYNNPKVAMSIILENGGAG
PAVGSIVRQILDHIILGDNNTNLPDAPPSPPGSETE
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgaatatagaacgtaaaccctttcgtgactatacggctgaggcagccctgttcgtacgc
cgggcgctggtcgcgttcctgggcattttgctgctgagcggtattctggtggccaatcta
taccacctgcaggtttcacgttttgacgattatcgtacccgttcgaatgaaaaccgtatc
aaactggtgccgattgccccgagccgcggcatcatttatgaccgcaacggcaccccgctg
gcgctcaaccgcacgatttaccagttggaactgattcccgaaaaggtcaacaatctggaa
gagacgctgcaggctctcaaatcgatcattgacctgaccgatgaagacattgataacttc
agaaaagagcgtaagcgctcgcgtcgcttcacgtccatcccggtcaaaaccggcttgaac
gaagtacaggtagccagcttcgccgtcaatcagtaccgttttcccggcgtggaagtcaaa
ggctaccagcgccgttactatccgtatggtgccgcgctgacccacgtcattggctatgtc
tccaaaatcaacgacaaagatctggaaagactggaccaggaaggcaagctgccggactac
gcggcaacccacgatatcggcaagctcggcattgagcgctattacgaagatgtgctgcac
ggcaaaccgggctacgaggaagtggaagtcaataaccgcgggcgcgtgattcgccaattg
catgaacaaccgccgcaagccggcaaagatatctatctgacgctggacctcaacctccag
ctctatatcgaaaaactgttggccggcagccgcgcggccgtggtggtgaccgacccgaaa
gacgcctccattctggcgatggtttccacccccagctacgacccgaacctgtttgtggac
ggcatttccagtaagacgtaccacgctttgctgaatgaccctaatcggccgttgatcaac
cgcgcgacgcaaggggtttacccgcctgcgtccaccgtcaaaccttatattgcggtttcc
gcgctgagcgccaatgtcattactccttatacctcgctgttcgaccctggttggtggcag
ttgcccggctcggaaaaacgcttccgcgactggaaaaaatggggacatggccgcctgaat
ctaaccaaatcgctggaagaatccgcggataccttcttctatcaggtcgcctatgatatg
gggattgaccgcctgtccgagtggatgggtaagttcggttacgggcaccggacaggcatc
gatttgtccgacaaggaagagagtccgggcatcatgccgacgcgggaatggaaaatgaag
cgctataaaaagccgtggtatcagggggataccattcctgtcggcatcggtcagggttac
tggaccgccacgccgattcagatgctgaaagcgctgaccaccttgatcaacgatggtcag
gtaaaagcacctcacctgctgagcagtacgcaggaaaacaatactcaggtgccgtaccgc
cagcaggaacaccagcagatcggcgatattcgctccggttactgggagatcgtcaaagac
ggtatgtacggcgtcgccaaccgccagaacggcaccgcccacaaattctttgccgacgcg
ccgtataagattgcggccaagtcagggacggcacaggtattcggcctgaaggaaaacgaa
acctataacgccaaccggattgccgaacggctgcgcgaccacaaactgatgaccgccttc
gcgccttataacaacccgaaagtcgccatgtccatcattctggaaaacggcggcgccggg
ccggccgttgggagcattgtgcggcagatactcgaccacatcatactgggcgacaataat
accaacctgccggacgcgccgccgtcgccgccgggcagtgaaaccgagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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