KEGG T01305: Dda3937

Dickeya dadantii 3937: Dda3937_03780

Entry

Dda3937_03780     CDS       T01305

Name

(GenBank) Ribosomal RNA small subunit methyltransferase F

K11392

16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]

Organism

ddd Dickeya dadantii 3937

Brite

KEGG Orthology (KO) [BR:ddd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddd03009]
    Dda3937_03780
Enzymes [BR:ddd01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     Dda3937_03780
Ribosome biogenesis [BR:ddd03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Dda3937_03780

SSDB

Motif

Pfam:

Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 Methyltransf_23 PCMT Methyltransf_25

Other DBs

NCBI-ProteinID:

ADM98753

UniProt:

E0SF11

Position

2728265..2729713

AA seq 482 aa
MAKPIPASLTPDFLTAMQAIMPAHLSMDAFIDACQRPLRRSIRINTLKISVADFLALVAP
YGWELEAVPWCDEGFWLLNADEEAMRLGNALEHLAGLFYIQEASSMLPVSALFMGDDAPE
RVLDMAAAPGSKTTQIAARLNNQGLIVANEYSASRVKVLHANLHRCGVSNTALTHFDGRV
FGNALPETFDAILLDAPCSGEGVVRKDPAAMSHWSLESIADIAATQRELILSAFHALKPG
GVLIYSTCTLNHQENQHVCRWLMQQFPDACEVESLKDLFPQAHHALTEDGFLHVFPQIYD
SEGFFVARLRKTAGVPPLAAPDYKLGKLPFTPLSHKDAQLIRQSAQRLGLQWSEQQLQLW
QRDDEIWLFPAALQPMLGKMRFSRMGVKLAERFAKGYRWQHEAIVALGNPDNPNTHALSA
EQVVDWFRGKDIYPPSPVNHDEVLLTWQQTTLGLTKRVGQRLKNTLPRDLVRDGANLISP
ID

NT seq 1449 nt +upstreamnt +downstreamnt
gtggccaaacctattcccgcgtccctcactcccgattttctgaccgccatgcaagctatc
atgcccgcgcacctgagcatggacgcattcatcgacgcctgccagcggccgctgcggcgt
agcatccgtattaacaccctgaaaatcagcgtggccgattttctcgcgctggtcgcgccc
tacggctgggaactggaagcggtgccctggtgcgatgaagggttctggctgctgaacgcg
gatgaagaagccatgcggctgggcaacgcgctggagcatctggccggcctgttctacatt
caggaagccagctcaatgctgccggtcagcgcgctgttcatgggggatgacgccccggag
cgggtgctggacatggcggccgcccccggctccaaaactacccagatcgccgcccggctc
aacaatcagggattaattgtcgccaatgaatattccgccagccgggttaaggtattgcac
gccaacctgcaccgctgcggcgtcagcaataccgccctgacgcattttgacggccgggtt
ttcggcaacgccttgccggaaacgtttgacgccatcctgctggacgcgccctgctccggg
gaaggcgtggtgagaaaagatcccgccgccatgagtcactggtcgctggagagcatcgcc
gatatcgcggcgacccagcgcgagctgatcctgagcgcttttcatgccctgaagccgggc
ggcgtgctgatttattccacctgcaccctgaatcatcaggagaaccagcacgtttgccgc
tggctgatgcagcagttccccgacgcctgcgaggtcgaatcgctgaaagatctgttccca
caagcgcaccacgccctcaccgaagacggctttttgcacgtcttcccgcagatttacgac
agcgaaggtttttttgtggcgcgcctgcgtaaaaccgccggcgtaccgccgctagcggcg
ccggattacaaactcggcaagctaccgtttacccccctcagccacaaggatgcgcagctg
attcgccaaagcgcgcagcggctgggcctgcaatggtcggaacagcagttacagttgtgg
cagcgggacgatgaaatctggctgtttccggcggctttgcagccgatgctgggcaaaatg
cgcttctcccgcatgggcgtcaaactggcggagcgctttgccaaagggtatcgctggcag
catgaagccattgtggcgctgggcaacccggacaacccaaacacccacgcgctcagtgcg
gagcaggtcgttgactggtttcgcggcaaagacatttatccgccttcgcccgtcaatcac
gacgaggttctgctgacctggcaacaaaccacgctgggattgaccaagcgtgtcggacag
cggctgaaaaacaccctgcctcgcgatctggttcgcgacggcgccaaccttatttcccct
atcgactaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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