KEGG   Oleidesulfovibrio alaskensis: Dde_2378
Entry
Dde_2378          CDS       T00294                                 
Name
(GenBank) RNA modification enzyme, MiaB family
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
dde  Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:dde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dde03016]
    Dde_2378
Enzymes [BR:dde01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     Dde_2378
Transfer RNA biogenesis [BR:dde03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    Dde_2378
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM
Other DBs
NCBI-ProteinID: ABB39175
UniProt: Q30YS1
Position
2401832..2403226
AA seq 464 aa
MHERTFHIMTFGCQMNVNDSDWLARALEARGFTQVPEHEAAIYIINTCSVRDKPEQKVYS
LLGRIRRETKNRRNVTVCVGGCVAQQIGKGFFKRFSQVRLVFGTDGAASAPQAIERLVQE
PHARISLLDFSEEFPERDAGWENGEVPVSAYVNIMQGCNNFCAYCIVPYTRGRQKSRSSA
AVLDECRTLVGNGAREITLLGQNVNSYGLDPHGDGTTFARLLHDVAAIPGLERLRFMTPH
PKDIAGEVIEAFGALKNLCPRVHLPLQSGSDRVLKAMGRKYDMARYMDIVTRLKAVRPDI
QITSDLIVGFPGETEADFEQTLEAMRTVPFVQSFSFIYSDRPGTRAEMLPGKLSREEKTA
RLVRLQEVQNEYSEAALQAMVGKTVMVLFESPSPKSAAGSGTDAQNAAEESGRTASSWQG
RDEHGFILNVHLPAPADLYGKIMPVTVTAARKHSLTGEPAGESC
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgcatgaaagaactttccatataatgacctttggctgccagatgaacgtcaacgattcc
gactggctggcgcgtgccctggaagcccgcggctttacacaggttccggaacatgaggcc
gccatatacatcatcaacacctgttcagtccgcgacaaaccggaacagaaagtctattca
ctgctcggacgcatacgcagagaaacaaaaaacagacggaatgtgaccgtatgtgtgggc
ggctgcgtggcgcagcagataggcaaaggctttttcaagcggttcagtcaggtccggctg
gtattcggcaccgacggggcagccagcgcgccgcaggccatcgaacggctggtgcaggaa
ccgcacgcccgcatcagcctgctggatttttccgaagaatttcccgaacgcgatgcaggg
tgggaaaacggcgaagtacctgtctccgcgtatgtcaatattatgcaggggtgcaacaac
ttctgcgcatactgcattgtgccctacacccgcggcaggcagaaatcgcgcagttcggcc
gccgtgctggacgaatgcagaacgctggtcggcaacggagcgcgggaaatcaccctgctg
gggcagaacgttaattcctacgggcttgatccgcacggcgacgggacaacgtttgcccgg
ctgctgcatgacgtggctgccatacccggtcttgaaaggctgcgtttcatgactccgcat
cccaaagacatagccggtgaagtcattgaagccttcggagcgctgaaaaatctctgcccc
agagtacacctgccgctgcagtccggttctgacagagtgctcaaagccatgggccgcaaa
tacgacatggcccgctacatggacattgttacccgtctgaaagcggtccgccccgacatt
cagataaccagcgacctcatagtcggttttccgggcgaaacggaagcagattttgaacag
acgctggaagccatgcgcaccgtgccctttgttcagagcttttcattcatctattccgac
aggcccggcacacgggctgagatgctgcccggcaagctttcgcgcgaagaaaaaaccgca
cggcttgtcaggctgcaggaagtgcagaatgaatacagtgaagcagcgctgcaggctatg
gtcggcaaaacagtcatggtgctgtttgaaagccccagccccaaaagtgcagccggttcc
ggtacggacgcacagaatgcagcggaagaatcgggccggacggcatcctcatggcaggga
cgggacgagcacggctttatactgaacgtgcacctgcccgcacccgcagacctgtacggc
aaaataatgcccgtcacagtgaccgccgcacgcaaacactcgctgacgggcgaacccgcg
ggggaatcatgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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