KEGG   Deferribacter desulfuricans: DEFDS_0408
Entry
DEFDS_0408        CDS       T01188                                 
Name
(GenBank) conserved hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ddf  Deferribacter desulfuricans
Pathway
ddf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ddf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DEFDS_0408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddf03019]
    DEFDS_0408
Messenger RNA biogenesis [BR:ddf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DEFDS_0408
SSDB
Motif
Pfam: RMMBL Lactamase_B Lactamase_B_2 Lactamase_B_6 DUF881
Other DBs
NCBI-ProteinID: BAI79902
UniProt: D3PBC9
Position
393409..394995
AA seq 528 aa
MSTKISIFGGAGEIGMNMYLYESESVAFLVDCGVKFADNSYPGIDMIIPDWDYLKSIKDK
LRAIILTHGHEDHIGGVPYLLEDFDLEVYGGNLTIKLLEYKFYERKIKVLTNVVKDKDVI
NVGDFQIEFVSVTHSIQDTFGLFITNNDLKLLHISDYKMDQAPVNGKPFDVHRFMEIGKK
GVTALLSDSTNVVNDGLTPSESSIYNDLLDVFLQANGRVFFTTFSSNLDRIKQVVEICEQ
IGRKIVVDGSSVTKSVKIGRELGLLNIKQDTLISLQEAKKLDDDKVCFIISGCQGEVNST
LYKIASNERKMLKAKEGDLFIISARVIPGNELNLNNTINKLYYYGAKVVDIEEKKIHVSG
HASKEEAKLMLNFIRPKYLIPIHGEYRHLKTHIELLKEVNYDVETEGIFAEDGEILVFEG
EKLVGQDNFESKRKYIDARGEFVLTEEDLKLKKNLARDGIVIIQDFGKEFSLETVGFTLN
KEDENRLRYFIDENMGVVDLSRDELLVNIVRRFFKKRFDKRPVVKYLI
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgagcacaaagatatctatttttggcggagcaggcgaaattggaatgaacatgtatcta
tatgaaagtgaatctgtggcctttttagtagattgtggtgtaaaatttgcggataatagt
taccctggtattgatatgattatccctgattgggattacctaaaaagtataaaagataaa
ttgagagctattatcttgactcatggtcatgaagatcacattggaggtgttccttaccta
cttgaagactttgatttagaggtttatggaggaaatcttactatcaaactgttagaatat
aaattttatgaaagaaagataaaagttttgacaaatgttgtaaaagacaaagatgttata
aatgtaggtgattttcaaatagagtttgtaagtgttactcattctattcaagataccttt
ggactttttattacaaacaatgatttaaagcttttgcatatatcagattataagatggat
caggctccagtaaatggaaagccttttgatgtccacagatttatggagatagggaaaaaa
ggggttacggctttattgagcgattccacaaatgtagttaatgatggtctgactccatct
gaatcatccatttataatgatcttttagatgtttttttgcaagctaatggaagggttttc
tttactacattttcttcaaatctggacagaattaaacaggttgtggagatatgtgagcag
ataggtagaaaaatagttgtggatggttcttctgtgacaaagagtgtaaaaattggtaga
gaacttggtttattgaatattaaacaggatactttaatcagcttacaagaggcgaaaaag
cttgatgatgataaagtttgttttattatatcaggttgtcagggtgaagtaaattccaca
ctctataagatagcatccaatgaaagaaagatgttgaaagcaaaagaaggggatctcttt
attatttctgctagagtaatcccagggaatgaactcaatttgaataatactataaataaa
ctttattactatggggctaaagttgttgatatagaggaaaagaagattcatgtgtcaggt
catgcatcaaaagaggaagctaaattgatgcttaattttatcaggcctaagtatttaatc
cctattcatggggagtatcgacatttgaaaacacatattgagcttttaaaagaagtaaat
tatgatgttgaaacggaaggtatttttgctgaagatggagaaatattggtttttgaaggt
gaaaaacttgttggacaagacaattttgaaagtaaaaggaaatatatagatgcaagaggt
gagtttgttttaacagaagaggatttgaaacttaaaaaaaatcttgcaagagatggtatt
gtaataattcaggactttggaaaagaatttagtttagaaacggtgggttttacgttgaat
aaggaggatgaaaatagattgcgttattttattgatgaaaatatgggtgtggtagattta
agtagagatgagttgttggttaatattgtgagaagattttttaagaaaagatttgataaa
agaccagttgttaagtatttaatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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