KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0267708
Entry
DDB_G0267708      CDS       T00245                                 
Symbol
vps25
Name
(RefSeq) vacuolar protein sorting 25
  KO
K12189  ESCRT-II complex subunit VPS25
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    DDB_G0267708 (vps25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ddi04131]
    DDB_G0267708 (vps25)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ddi04147]
    DDB_G0267708 (vps25)
Membrane trafficking [BR:ddi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    DDB_G0267708 (vps25)
Exosome [BR:ddi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   DDB_G0267708 (vps25)
  Exosomal proteins of colorectal cancer cells
   DDB_G0267708 (vps25)
SSDB
Motif
Pfam: ESCRT-II PAS_12 Ribosomal_L4
Other DBs
NCBI-GeneID: 8616050
NCBI-ProteinID: XP_647245
dictyBase: DDB_G0267708
UniProt: Q55GD9
Position
1:complement(670930..671606)
AA seq 194 aa
MSNQVFQFPPYYHKEPFFTIQPILNTRKKQFQMWQDLILQYCRYYKIYELDINESIKSNS
VLFNNEKINRKLSREALKSIIDDIIENGFAEWVDKEKEKEKEKDKDNNNNNRVLIMWRKP
DEWASLIYKWVADCGLLNTVLTVWEIQNGDDSKKQEFHQLNTTILMKSLKVLEKQSKCQT
FSQDENVGVKFFSI
NT seq 585 nt   +upstreamnt  +downstreamnt
atgagtaatcaagtttttcaattcccaccttattatcataaagaaccattcttcactata
caaccaatattaaacactagaaagaaacaattccaaatgtggcaagacctaattctccaa
tattgtagatattataaaatttatgaattagatattaatgaatctataaaatcaaactca
gtattatttaataatgaaaaaataaatagaaaattatcaagagaagcattgaaaagtata
attgatgatataattgaaaatggatttgcagaatgggttgataaagaaaaagaaaaagaa
aaagaaaaggataaggataataataataataatagagttttaataatgtggagaaaacca
gatgaatgggcatcacttatttataaatgggtagctgattgtggtttattaaatacagtt
ttaacagtttgggaaattcaaaatggtgatgactcaaagaaacaagaatttcatcaatta
aatacaacaatcttaatgaagtctttaaaagttttagaaaaacaatcaaaatgtcaaacg
ttttctcaagatgaaaatgttggtgttaaattcttttcaatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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