KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0267714
Entry
DDB_G0267714      CDS       T00245                                 
Symbol
sf3b4
Name
(RefSeq) RNA recognition motif-containing protein RRM
  KO
K12831  splicing factor 3B subunit 4
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DDB_G0267714 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0267714 (sf3b4)
Spliceosome [BR:ddi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    DDB_G0267714 (sf3b4)
 Complex B
    DDB_G0267714 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    DDB_G0267714 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 SKG6 EMC3_TMCO1
Other DBs
NCBI-GeneID: 8616053
NCBI-ProteinID: XP_647248
dictyBase: DDB_G0267714
UniProt: Q55GD6
Position
1:complement(676187..677352)
AA seq 359 aa
MASNLPQERNHEACLLIRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHSGRAYVE
FQSSSDAEYALKVMKFVRLFNKEIKIKKENKDKVDIGANLFIGNLDADVDERILHDTFSR
FGTIIFTPKVMRDENGVSKGFAFINFDSFEASDAAIEAMNSQFLCNKPISVTYARKKDSN
ERHGSSAERIIAASRNTGYLNQQQQQQSSSTSSTSTISTSTPQQQQQQQSQPLPPPIVTA
GGIIHQQQIQQQQQLQQQQQQQLQLQQLQLQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQHHPHHQHPIPHPHPLPHQLRPHPHPHHPPPPPFNPMLMQFNPMMMPFGGMPPPPPHK
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggcatcaaatttaccacaagagagaaatcatgaagcatgtctattaattagagattta
gatccaatggttacagaatcattattaatggaattatttattcaagcagcaccagtagtt
aaagtattcataccaaaagataaattaactcaacaacattcaggtagagcatatgttgaa
tttcaaagttcttcagatgctgaatatgctttaaaagttatgaaattcgtacgtttattt
aataaagaaattaaaattaaaaaagaaaataaagataaagttgatattggtgcaaattta
tttattggtaatttagatgcagatgttgatgaaagaatattacatgatacattttcaaga
tttggtacgattatatttacaccaaaagttatgagagatgaaaatggtgtaagtaaagga
tttgcatttataaatttcgatagttttgaagcctctgatgcagcaatcgaagctatgaat
agtcaattcctttgtaataaaccaatctctgtaacttatgcaagaaagaaagattcaaat
gaaagacatggttcttctgctgaacgtattattgctgcaagtagaaatacaggttattta
aatcaacaacaacagcaacaatcatcttcaacttcttcaacctcaactatttcaacttca
actccacaacaacaacaacaacaacaatcacaacccctacctccaccaattgtcactgca
ggtggtataattcatcaacaacaaatacaacaacaacaacaattgcaacaacaacaacaa
caacaattacaattacaacaattacaattacaacaattacagcaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaccacccacaccaccaacatccaataccacacccacacccactcccacatcaa
cttcgtccacatccacatccccaccatcctccaccaccaccattcaacccaatgttaatg
caattcaatccaatgatgatgccatttggtggaatgcctccacctccaccacataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (58)   

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