KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0272871
Entry
DDB_G0272871      CDS       T00245                                 
Name
(RefSeq) hypothetical protein
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DDB_G0272871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0272871
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0272871
Enzymes [BR:ddi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     DDB_G0272871
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     DDB_G0272871
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     DDB_G0272871
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 8618602
NCBI-ProteinID: XP_644923
dictyBase: DDB_G0272871
UniProt: Q558Z3
Position
2:2056744..2057388
AA seq 214 aa
MSTQSPTSTNNNISNIANQCNKRIAMVCASNQNRSLEAHHLFVKNGFKNIRSFGTSAHCK
LPGPSIHQPNIFSFGTPYQEIYTSLKNQDQELYIRNGLLNMLERNISVKLAPEKWQEEQQ
SKFEIVYTFDQRVYDAVIEDLLQRDVSSSLLQPVHIINLQVKDTHEEAVGGAQHALEITS
IIEKTLNWEEKLDQILEDFYKQTSRQFLHTLMFY
NT seq 645 nt   +upstreamnt  +downstreamnt
atgtctacacaatcaccaacttcaacaaataataatattagtaatattgcaaatcaatgt
aataaaaggattgcaatggtatgtgcatccaatcaaaatcgtagtttggaagcacatcat
ttatttgtaaagaatggatttaagaatataaggtcatttggtacatcagcacattgtaaa
ttaccaggaccatcaattcatcaaccaaatatattttcatttggtacaccatatcaagag
atctatacatcactaaagaatcaagatcaagaactttacattagaaatggtttattgaat
atgttggaacgtaatatctctgttaaacttgcaccagagaaatggcaagaagaacaacaa
tcaaaatttgaaatcgtctatacatttgatcaacgtgtttacgatgccgtcattgaagat
ctcttacaaagagatgtatcctcctcactattacaacctgtacatataatcaatttacaa
gttaaagatactcacgaagaagctgtaggtggtgcacaacatgctttagaaattacttca
atcattgaaaaaactcttaattgggaagagaaattagatcaaattttagaagatttttat
aaacaaacttcaagacaatttttacatactttaatgttttattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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