KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0275845
Entry
DDB_G0275845      CDS       T00245                                 
Symbol
smg1
Name
(RefSeq) PIKK family protein kinase
  KO
K08873  serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DDB_G0275845 (smg1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ddi01001]
    DDB_G0275845 (smg1)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0275845 (smg1)
Enzymes [BR:ddi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     DDB_G0275845 (smg1)
Protein kinases [BR:ddi01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   DDB_G0275845 (smg1)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     DDB_G0275845 (smg1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     DDB_G0275845 (smg1)
SSDB
Motif
Pfam: PI3_PI4_kinase SMG1 FATC
Other DBs
NCBI-GeneID: 8620049
NCBI-ProteinID: XP_643468
dictyBase: DDB_G0275845
UniProt: Q553E9
Position
2:5665840..5673077
AA seq 2344 aa
MNDSNSSNDSCNTENNTLTATKNSINNTTTTTTTPNNNVNCLKTSGSIKLSASSVPFIPG
SSASLPSILSNQYKLAASNNVSNNIMMISTPIISSAQQQQQQVPPPQQTTTTTTATATAI
TPTPITTSQSTSSSMLNLPLKVGKESIETLFRNRFHPKNNIRETVLSSLQSILIPDLSDT
INNTKENIEYFYNMIIDENNYILKLLLLNIINDTKRNLVVYNYNQQHQLPIQNTSSPNTP
SSTTTTTTTSTKPSKRGDKERERGRRNKDKINEKQLQQQQLQQLQLQQQLDHEGSSLYLP
FSSLLSFIKPDKQQQPQQSQQSQLNEIDQMVRPKSLPKDDNDSDNFNIRVLEYNLKLLIK
IYFKVSMYQDSIKTHIFDLYIQINQAISEQQRQLQEKEKESKTSKPIPQPIISLVIPTVL
VSIGDIIKYKYATPSPPNLTPTTTTKMEEEERIINTILINEFKKTDVSIIESNLYLFECI
LSISVSNEPTIVVPNTTTATTATTATTSNTSTAAAATTTTPTLSTSSSSLSPPASTQSSL
SLSSSSSAVIAPTTVGYIFKFNKELFRKLIALVYSTVVQHQITLSTVFTTLVLKGYLNED
QIQKLLNITLFKLSDPSEQVKLSYLTLLSKMVSYFDLNHQKNLNHKVNDISLPYKLLIMG
STSQPFFNGQIFKKIFDWIMGIGKDQPSFDSLTKYLIDLFDSFNVISILFNEQNKILSQQ
YLAAQSTMITPPLSLHQIDDRRKFETLISKSDELIWFWTVWECSKFCIANRLKSPYGSAF
QTFEIFEKLLLQLNKDRRDFKKIKILLHFMESMEKLIFSTVNGSVLVQSLNNKETQFFRH
NVRVCEDWFSRIRVNLLKASILSSSTPDIIRHASLRVQDIQANRFVLDSNTAHFELEFCI
LHLANALQQLNETESLQGLSNWSDINLNNSDNNNNNNNKNNNNNNNSTFFNNGNINKYTL
KLPWMKGVILRSKQKFEESISSLLSVPPMLESNSISFPFVLEQIIKSYLDISNFTEVEQF
LQNYQNQIQQQSNSLIIYKDTFIKTLGSFYRGEMEEAHAFAKRTESQNHILQREQLGLGL
LGNQIMTDELLLSIMVNQKDLFNNTNIINNNNSGGSSSGTATATAVTTTTTTTTTTTTTT
TTTTNTNNDIIGFSNNINSMLKLTKNNILKALNYLGLESNVQTFQYLTQLKIMDEIENGV
YNSRVVPINNQIGFLERLRRVRGHISNTKQRSDILLSNIPLTEKMIKLSRKFENYKFSSK
LLDTILESHSSSYYLERCKLKYLNGKQTEATLDLIKYAHRDITIPSSSTTTTTTTTTTTP
PSTSSNTATTTNNINIDELSTQKFKVYTEIIKYLNSNPSIITELSSSNYSIPQEQLNPEY
YFKKATLTKPENSKLWITYADWILNEKSNISEQNDEESLNGGGSGGNENSSNEMLRLKNT
NTNELKTAVEAYFQFLKYSMLDGNSNGGLNIRATLKILNILVCSGNKLVETFERCLNELT
STRPFTIIIPQLFARLSHPDTFVQKYVVEILNRIGRDNPNKIVYQTIVGSLNFTNTNNNN
NSSCAAATTDDGLDIELLQKQYPNYLQILNIKENLLKHSELLVKETETLIYQLGKLTTLW
DDNWQYFIEQIQGWVYINTKQWNDDYQQLKATIKNPTILKHTLKKKNQELLQPIYEKLKR
LTAATVLSVCKTPHEKWFTKCHFETINKTIRAFEKQNKPTSPFDVLHDLIAEFQQYRLIS
LSLSSVNPSLALFRPTITQMPGTDLNYFNINHIHHHHHHHNHHGNNNNQHSTSSGNLPIQ
NQVTIQLIKPTIYLLPTKTKPKKMAMLGSDGNLYYYLLKGREDLHLDERIMQLLNVVDQL
LMNDKKPTLKLLRTRNYSVIPLSQSSGLIQWVEGAVPLFSIYKNWYKNDQVYKQQQQQQQ
QLQQQQQQQQQQQQQQPQPQQQPQQQPQQQPQQQPQPQQNSTTTSNIVNKPIIARPVDIF
YAKITPLLEKAGLNFMTPRSEWPKEILIQVLNELMQETPKWILQRELWFSSSSSSELFLK
TQSYSRSLALMSVIGYMIGLGDRHLDNILLDLKTGEIVHIDYNICFEKGAELKIPERVPF
RMTQIFEYALGLTGVQGTFRETSIQIMHLLRKNKDILLNLLETFIYDPLFDWKHSNKQTN
NNNNNNNNNNMNQAAGEQESIEKKQSSNNSSNPIISTPTKLQQQQKLPNSPLSISSNNTN
STNNNNNNNNNNNNNNNNNNNNNNKDQDSDSSQSQEDEDNNVVEGEGGEGGEGDIDELNL
VQDSSNGKDAFKSIQGLTVVNQVRLKLEGTEKKLSIPDQIDLIIRESMNVENLSSTYEGW
SPWV
NT seq 7035 nt   +upstreamnt  +downstreamnt
atgaatgattcaaatagcagcaatgatagttgcaacaccgaaaataataccttgacagcc
actaaaaatagcatcaacaacacaactacaaccacaaccacacctaataacaatgttaat
tgtttaaaaaccagtggtagtattaaactatcagcttcatcagtaccatttataccaggc
tcatcagcatcattgccatctattttatcaaatcaatataaattagcggcatccaataat
gtatcaaataatattatgatgatttccacaccaatcatttcttcagcacaacaacaacaa
caacaagtaccaccaccacaacaaactacaacaacaacaacagcaacagcaacagcaata
acgccaacacctattacaacatcacaatcaacatcatcctcaatgttaaatttaccatta
aaagttggtaaagaatctattgaaacattgtttaggaatagatttcatccaaaaaataat
attagagaaactgttttatcatcattacaaagtatattaatacctgatctatcggatact
attaataatacaaaagagaatatcgaatatttttataatatgatcattgatgaaaataat
tatattctaaagttattattattaaatataataaatgatacaaaaagaaatttagtagtt
tataattataatcaacaacatcaattaccaattcaaaatacatcatcaccaaatactcca
tcatcaacaacaacaacaacaactacatcaactaaaccatctaaaagaggagataaagaa
agagaaagaggtagaagaaataaagataagattaatgaaaaacaattacaacaacagcaa
ttacaacaattacaattacaacaacaattagatcatgaaggttcttcactttatttacca
ttttcaagtttattatcttttattaaacctgataaacaacaacaaccacaacaatcacaa
caatcacaattaaatgaaattgatcaaatggttagaccaaaatcattaccaaaagatgat
aatgatagtgataattttaatattagagttttggagtataatttaaagttattgataaag
atttatttcaaggtatcaatgtaccaagattcaattaaaactcatatctttgatttatat
atacaaattaatcaagcaatctctgaacaacaaagacaattacaagagaaagagaaagag
agtaaaacttcaaaaccaataccacaaccaatcatttcattggtaattccaacggtattg
gtatcgattggtgatatcataaaatataaatatgcaacaccttcaccaccaaatctaaca
ccaacaacaactactaaaatggaggaagaggaaagaatcattaatactatattaattaat
gaatttaaaaaaactgatgtttcaatcattgagtcaaatttataccttttcgaatgtatt
ttatcaattagtgttagtaatgaaccaacaattgtagtaccaaatacaacaactgcaaca
actgcaacaactgcaacaacatcaaatacttctacagcagcagctgcaacaacgacaaca
ccaacactatcaacatcttcttcatcattatcaccaccagcatcaacacaatcatcatta
tcattatcatcatcatcatcagcagtgatagcaccaacaacagtaggttatattttcaaa
tttaataaagaattatttagaaagttaatagcattagtttattctacagtagttcaacat
caaataaccttatctactgtatttacaacattggttttaaaaggttatttaaatgaggat
caaattcaaaaattattaaatattacattatttaaattatcagatccaagtgaacaagtt
aaattaagttatttaacattattaagtaagatggtatcatatttcgatttaaaccatcaa
aagaatttaaatcataaagttaatgacatatcattaccttataaactattgataatggga
tcaacaagtcaaccattttttaatggtcaaatttttaaaaagatatttgattggatcatg
ggaattggtaaagatcaaccatcttttgattctttaacaaagtatctaatcgatttattc
gatagttttaatgtaatctcaatattattcaatgaacaaaataaaatattatcacaacaa
tatttagctgctcaatcaactatgataactccaccattaagtttacatcaaattgatgat
agaagaaaatttgaaacattaatatcaaaatctgatgaattaatttggttttggacagtt
tgggaatgtagtaaattttgtattgccaatagattgaaatcaccatatggtagtgcattt
caaacgtttgaaatctttgaaaagttattattacaattgaataaggatagaagggatttt
aaaaagataaagattttattacattttatggaatctatggagaaattaattttctccact
gttaatggatcggttctagtacaatcattaaacaataaggagactcaattctttagacat
aacgttagagtttgtgaagattggttctctagaattcgagtaaatctattgaaagctagt
attctatcaagttcaacaccagatatcattagacatgcttcacttagagttcaagatatt
caagctaatagattcgttctagattcaaatacagctcattttgaattggaattttgtata
ttacatttagcaaatgccctacaacaattaaatgaaactgaatcattacaaggtttatca
aattggtctgatataaatttaaataatagtgataataataataataataataataaaaat
aataataataataataattcaacattctttaataatggtaatattaataaatatacatta
aaattaccatggatgaaaggtgttatattaagaagtaaacaaaagtttgaagaatcaatt
agttcattattgagtgtaccaccaatgttggaatcaaattcaatatcatttccattcgta
ttggaacaaattattaaatcttatttagatatttcaaattttacagaggttgaacaattt
ttacaaaattatcaaaatcaaattcaacaacaatcaaattctttaataatctataaagat
acattcattaaaactttgggttcattctatcgtggtgaaatggaagaagctcatgctttt
gcaaagagaactgaatctcaaaatcatatattacaaagagaacaattaggtttaggttta
ttaggtaatcaaattatgactgatgaattattattatcaattatggttaatcaaaaagat
ttatttaataatacaaatattattaataataataatagtggtggcagtagtagtggtaca
gcaacagcaacagcagtaacaacaacaacaacaacaacaacaacaacaacaacaacaaca
acaacaacaacaaatacaaataatgatattattggatttagtaataatattaatagtatg
ttaaaactaacaaagaataatatattaaaagcattaaattatttaggattagaatcaaat
gttcaaacatttcaatatttaacacaattgaaaattatggatgaaattgaaaatggtgtt
tataatagtagagtggtaccaattaataatcaaattggattcttggagagattaagaaga
gttagaggtcatatttcaaatactaaacaacgttctgatattcttctaagtaatatacca
ttgactgaaaaaatgattaaactatcaagaaaatttgaaaattataaatttagttcaaaa
ttattagatacaattttagaatctcattcatcttcctattatttagaacgttgtaaatta
aaatatttaaatggtaaacaaactgaagcaactttagatttaattaaatatgcacatcgt
gatataacaataccatcatcatcgacaacaacaacgacaacgacgacaacaacaacacca
ccatcaacatcatcaaatactgctacaacaacaaataatataaatattgatgaattatca
acacaaaaatttaaagtttatacagaaattattaaatatttaaattcaaatccatcaatt
attacagaattatcatcatcaaactattctatacctcaagaacaattaaatccagaatat
tattttaagaaagcaactttaactaaacctgagaattcaaaattatggataacctatgct
gattggattttaaatgaaaaaagtaatatatctgaacaaaatgatgaagaatcattaaat
ggtggtggtagtggtggtaatgaaaattcatcaaatgaaatgttaagacttaaaaataca
aatactaatgaactaaaaacagcagttgaagcatatttccaatttttaaagtatagtatg
ttggatggtaatagtaatggtggtttaaatattagggcaacacttaaaatattgaatatt
ttagtttgttcaggtaataaattggttgaaacatttgaaagatgtctaaatgaattaact
tcaactcgtcctttcacaattattataccacaattatttgcaagattaagtcatcccgat
acatttgttcaaaaatatgttgttgaaattttaaatagaattggtagagataatccaaat
aaaatagtttatcaaactattgttggttctttaaattttacaaatacaaataataataat
aatagttcttgtgctgctgccactactgatgatggtttagatattgaattattacaaaaa
caatatccaaattatttacaaattttaaatattaaagagaatctattaaaacattcagaa
ttattagtaaaagagacagagacactcatttatcaattaggtaaacttacaacattgtgg
gatgataattggcaatatttcattgaacaaattcaaggttgggtctatattaatactaaa
caatggaatgatgactatcaacaattgaaagccacaataaagaatccaaccatactaaaa
catactctaaagaaaaagaatcaggaattacttcaaccaatttatgaaaagttaaaacgt
ttaactgctgccaccgttttatcagtttgtaaaactccacatgaaaaatggtttaccaaa
tgtcatttcgaaactataaacaaaacaatacgtgcatttgaaaaacaaaataaaccaacc
tctccattcgatgtacttcatgatttaatagctgaatttcaacaatatcgtttaatttct
ttaagtttatcatcagttaatccatcattagctttatttagaccaactataactcaaatg
cctggtactgatttaaattattttaatattaatcatattcatcatcatcatcatcatcat
aaccatcatggtaataataataatcaacattcaacatcaagtggtaatttaccaattcaa
aatcaagttacaattcaattaattaaaccaaccatttatttattaccaacaaaaactaag
ccaaagaaaatggcaatgcttggtagtgatggtaatctttattattatcttttgaaaggt
cgtgaagatttacatttggatgaaagaattatgcaattattaaatgttgtcgatcaatta
ttaatgaatgataaaaaaccaactttaaaactattgagaactagaaattattcagttata
cctctatctcaaagttctggtttaattcaatgggttgaaggtgctgtaccattattttca
atttataaaaattggtataaaaatgatcaagtttataaacaacaacaacagcaacaacaa
caattacaacagcaacaacagcaacaacaacaacaacaacaacaacaaccacaaccacaa
caacaaccacaacaacaaccacaacaacaaccacaacaacaaccacaaccacaacaaaac
tcaactacaacttcaaatatagtaaataaaccaattatagctagaccagttgatatattc
tatgcaaagattacaccattattagaaaaggctggattaaatttcatgacaccaagatca
gaatggccaaaagaaatattaattcaagtactcaatgaactaatgcaagaaactccaaaa
tggattctacaaagggagttatggttttcaagtagctcttcatcagagttattcttaaaa
actcaaagttatagtagatctttagcattgatgtcagtgattggttatatgataggttta
ggtgatagacatttagataatattttattagatttgaaaactggtgaaatcgttcatatc
gattataatatttgttttgaaaaaggtgctgaattgaaaataccagagagagtaccattt
agaatgacccaaatctttgaatatgccttaggtttaactggtgttcaaggaacttttaga
gaaacaagtatacaaattatgcatttgttacgtaaaaataaagatatcctattaaattta
ttggaaacttttatttatgacccactatttgattggaaacattcaaataaacaaacaaat
aataataataataataataataacaataatatgaatcaagcagctggtgaacaagaatct
atagaaaagaaacaatcttcaaataattcaagtaatcctataatttcaacaccaacaaaa
ttacaacaacaacaaaaattgccaaatagcccattatcaatttcttcaaataataccaat
tccactaataataataataataataataataataataataataataataataataataat
aataataataataaagatcaagatagtgattcaagtcaaagtcaagaagatgaagataat
aatgttgttgaaggtgaaggaggtgaaggaggtgaaggtgatattgatgaattgaattta
gttcaagattcctcaaatggaaaggatgcatttaagagtatccaaggtttaactgttgtc
aaccaagtgagactaaaattagaaggtacagaaaagaaactatcaattccagatcaaatt
gatcttattataagagaatccatgaatgttgaaaatctatcctccacttatgaaggttgg
tctccatgggtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (96)   
   KEGG ORTHOLOGY (1)   
   RefGene (91)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (110)   

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