KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0277033
Entry
DDB_G0277033      CDS       T00245                                 
Name
(RefSeq) SWIRM domain-containing protein
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    DDB_G0277033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0277033
   03036 Chromosome and associated proteins [BR:ddi03036]
    DDB_G0277033
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     DDB_G0277033
Chromosome and associated proteins [BR:ddi03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    DDB_G0277033
   PBAF complex
    DDB_G0277033
   GBAF(ncBAF) complex
    DDB_G0277033
SSDB
Motif
Pfam: SWIRM SWIRM-assoc_2 SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 BRCT_2 Chromo BRCT
Other DBs
NCBI-GeneID: 8620732
NCBI-ProteinID: XP_642866
dictyBase: DDB_G0277033
UniProt: Q550R6
Position
2:complement(7295274..7299183)
AA seq 1223 aa
MTSNGTISSPNSEETTTPTTTTTTIVKNREFNINAKDFEDSAFLKKLEPVRQALVEKYNG
ADDQSLTTKSLGQLIFSLIQFYEDAFGKNATDKPSNKTKLPMKLLKDYSTNGSLFHVLDT
IQSFKTSQDWKKSDFKVASKKEKNIELLDLIESNLIKLELLKFPIVFLNSDVKSDKDLAK
IVENHGGKIVTDSKLATHIIKVDNNSNSNDQADLEYIRTIENKSKMSLVHWWYYPDSYDT
WLPSTEVEGDDPDLDQSHVGQWFLNPRWITDTEIFNEWMNEIDYELDESNNNNNSNSNSN
NTNNNSSTTNTNNNNNNNVNKDGPKSPSSQIKLTAAGTIPKKRGRKAKRKTLNSNNSNSN
SNSENTTAQDSNGGTEQSNGGDQMNVDSGSEVNDSNKRPLADPTSTPSKKQKHDDTDQQQ
LPPQPMQPLQEATTTTIPTDAENQQQIIQQISQQQQLLQNQLNQQPSIQQLPPPFAKPVP
NIAPPQTTTTTTSTTTTTNPTSPTKQTSPTGAAPITTNRPRSSSKSSNPTTPTTINTAGG
ITNPFASQPISSAPSSTDSNNLGAINPTTLIPVNSNGTPLSPRSQITQQSQQQLLPQQQV
LPQQQQQQQQSLPQQPTTTTTTSVQPQPQPPKNVTLQSSFTIPPSQCTWFKMERIHEVEK
NQLPEFFTGKSPSKTPEVYKEYRDFMINTYLQNPYQYLTLTAIRRNLVGDVCSILRVHSF
LEHWGLINYFVNPDGGAYIPLLSSNNNNNNNNNNNNNNNNNNNNNNSNNSNNNTIERETT
TTSTTTTTTTTTKEKITSPKQSTSSSSSSSSSSSSTNNISKPFSTSLDLRQNLFSQPFRH
ICSKCSQDCTFLRYSFTPAPPPQDQAVSGEQVIQPQPPQTILLCNNCFTNDQTFIDHSHL
IKDQFKKIELPEPSPLEDQWTDQETLLLLEALDIYSDSWNDVADHVKTKSKEQCLLQFLK
LPIEEPYLEDNITKSISLQPPSSNSILNGSSSNNNNNNNNNQQLLNNPIVSMISFLSTSV
SSEVASAAAKAATDVLNKENGDSMITDNDNDDNDHLSKVNIQAAASATLAATSIKAKALS
KSEEREIQSLILKIINVQTKKLELKLKCYSEMENALEKEKNQLEKERQALFSERFSLLKA
SQNNQLQQQIPSYLVNQNKKDHQQQQSQLQSQLQQQPQQQQQQNYNDQPSATTTTTTTTT
INANTITTTTNESTQTEEAMKEN
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgacatcaaatggaacaatttcatcaccaaatagtgaagagacaaccacaccaacaaca
acaacaacaacaatagtaaagaatagagaatttaatatcaatgccaaagattttgaagat
tcagcttttttaaagaaattagaaccagttagacaagcattagttgaaaaatataatggt
gccgacgaccaatcattaacaaccaaaagtttaggtcaattaatatttagtttaattcaa
ttttatgaagatgctttcggtaaaaatgcaactgataaaccatcaaataaaaccaaatta
ccaatgaaattattaaaagattattcaacaaatggatcattatttcatgttttagataca
attcaatcatttaaaacttcacaagattggaaaaaatcagattttaaagttgcttcgaaa
aaagagaagaatatagaattattagatttaattgaatcaaatttaattaaattagaatta
ttaaaatttccaattgtttttttaaattcagatgtaaagagtgataaagatttagcaaag
atagttgaaaatcatggtggtaagattgtaacagattccaaattggcaacacatattatt
aaagttgataacaatagtaatagtaatgatcaagcagacttggaatatattagaactatt
gaaaataagagtaaaatgagtttagtacattggtggtattatccagattcatatgatact
tggcttccatctacagaggtagaaggtgatgatcctgatctcgatcaatctcatgttggt
caatggttcctaaatccaagatggatcactgatactgagattttcaatgaatggatgaat
gaaatcgattatgaattggatgaaagtaataataataacaatagtaatagtaatagtaat
aatactaataataacagttcaactactaataccaacaacaacaacaacaacaatgtaaat
aaagatggtccaaaatcaccatcatctcaaattaaattaactgcagctggtactatacct
aaaaagagaggtagaaaagcaaagagaaagacattaaatagtaataatagcaatagcaat
agcaatagtgaaaatactacagcacaagattcaaatggtggtacagaacaatcaaatggt
ggtgaccaaatgaatgttgattcaggtagtgaagttaatgattctaataaaagaccatta
gctgatccaacttcaaccccaagtaaaaaacaaaaacatgacgatactgatcaacaacaa
ttaccaccacaaccaatgcaaccattacaagaagccaccacaactaccattccaacagat
gcagagaatcaacaacaaataatacaacaaatatcacaacaacagcaattattacaaaat
caattaaatcaacaaccaagtatacaacaacttcctccaccatttgccaaaccagtacca
aatattgcaccaccacaaacaactacaactaccacttctaccactactaccactaatcca
acatcaccaaccaaacaaacaagtccaacaggagcagcaccaataacaaccaatagacca
agatcatcatcaaaatcatcaaatccaacaacaccaacaactatcaatacagctggtggt
attacaaatccatttgcatcacaaccaatctcttctgctccatcatcaactgattcaaat
aatttaggtgctattaatccaactactttaataccagttaattcaaatggtactccatta
tcaccaagatctcaaattactcagcaatcacaacaacaattacttccacaacaacaagta
ttaccacaacaacaacaacaacagcaacaatcattaccacaacaaccaacaacaactact
acaacatcagtacaaccacaaccacaaccaccaaaaaatgttacacttcaatcatcattt
acaattccaccatcacaatgtacttggttcaagatggaaagaatacatgaagttgaaaag
aatcaattaccagaattttttactggtaaatcaccatcaaaaacacctgaagtttataaa
gaatatcgtgattttatgatcaacacttatcttcaaaatccatatcaatatttaacactt
actgcaattagaagaaatttagttggtgatgtttgttcaatacttcgtgttcatagtttc
cttgaacattggggtttgattaattattttgtaaatccagatggtggtgcttatatacca
ttattatcttctaataataataataataataataataataataataataataataataat
aataataataataataatagtaataatagtaataataatacaattgaaagagaaacaaca
acaacatcaactacaaccacaaccacaacaactacaaaagaaaagataacatcaccaaaa
caatcgacttcctcatcctcttcatcatcatcttcatcatcatcaacaaataatatatcg
aaaccattttcaacatcattagaccttagacaaaatttattctcacaaccatttagacat
atttgttctaaatgttcacaagattgtacattccttagatatagttttacaccagcacca
ccaccacaagatcaagcggtatcaggtgaacaagtgattcaaccacaaccaccacaaacc
atacttttatgtaataattgtttcaccaatgaccaaacatttattgatcattcacatttg
ataaaggatcaattcaaaaagattgaattacctgaaccaagtccattggaagatcaatgg
actgatcaagagactttattacttttggaagcattggatatctatagtgactcttggaat
gatgttgctgatcatgttaaaactaaatcaaaggaacaatgtttattacaattcttaaag
ctaccaattgaagaaccttacttggaagataatatcacaaaatcaatttcacttcaacca
ccatcttcaaattcaattttaaatggtagttcttcaaataacaacaacaacaacaataac
aatcaacaattattaaataatccaatagtttcaatgatttctttcttatcaacaagtgta
tcttctgaagtcgcttctgctgctgcaaaagctgcaactgatgtattaaataaagaaaat
ggtgactctatgataactgataatgacaacgacgacaatgatcatctctcaaaagtaaat
attcaagctgctgcctctgctactttagctgcaacaagtattaaagcaaaagcattaagt
aaatctgaagagagagaaattcaatcactcatattaaagattattaatgttcaaacaaag
aaattggaattaaaattaaaatgttattctgaaatggaaaatgctttagaaaaggaaaag
aatcaattagaaaaagaaagacaagctttattctctgaaagatttagtttattaaaagct
tctcaaaataatcaattacaacaacaaattccatcttatttagttaatcaaaataaaaaa
gatcatcaacaacaacaatcacaattacaatcacaactacaacaacaaccacaacaacaa
caacaacaaaactataacgatcaaccttcagcaacaacaacaacaacaaccacaacaact
atcaatgccaatactatcactacaactacaaatgaatcaacacaaacagaagaagcaatg
aaagaaaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (85)   

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