KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0283769
Entry
DDB_G0283769      CDS       T00245                                 
Symbol
HBS1
Name
(RefSeq) hypothetical protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DDB_G0283769 (HBS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0283769 (HBS1)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     DDB_G0283769 (HBS1)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 MMR_HSR1 GTP_EFTU_D2 CUE GTP_EFTU_D4 Suf Sigma70_ner
Other DBs
NCBI-GeneID: 8624279
NCBI-ProteinID: XP_638881
dictyBase: DDB_G0283769
UniProt: Q54QJ0
Position
4:1138835..1141696
AA seq 729 aa
MSRHRFLKNMDGDDFEDFKEEDDLGEYDDEVYDVYDVVVEKFPDITYPEIEKVLMDFDYN
VDDAIDFILNGGLNNKGKKKNNKKPPQAVNIINNNNNNKKSEPVNTNKSTSKGQRRPRKS
TSENNNSNNNSNNNDDDDDNNKNKNNNNNNKNNNGYKPSSLAQDLSAITNTISNIKIIND
KEFSFQSLYKNNKDNVTNSLKTLSIGGNNNNKVPVESKTPYNTPIGTPINDKNLPHSPKE
SLIDSINATTVNKNLNVKQHSINRKKELEEMVHVAFSSSDNKPHLNMVVIGHVDAGKSTT
MGHILFKLGYVDKRTMSKFENESNRMGKSSFHFAWVLDEQEEERERGVTMDVCVRYFETE
HRRITLLDAPGHRDFIPNMISGTTQADVAILLINASEFEAGFSAEGQTKEHALLAKSLGI
MELIVAVNKMDSIEWDQSRYDYIVETIKTFLVHAKFNEKNIRFIPISGFTGENLIDRQES
KLLKWYDSKQPTLIECIDSFSVGERLLNKPFRMNISDVYKSSSKGYVAVGGKIEAGLLGN
GDKILISPGNDICTIKSIRRNNLESEWAVGGDNVDLSLVVENPSILRVGCILSDPEKPIP
LSKRFIAQIVTFTLPIPMTNGYQVVFHAHSMEEPATITRLISLLDSNGAVSKKNPRCISD
TCTALVEITLGRLSCLELYSSYRQLGRFTLRNGGVTIAAGLITEFYDNPPKKSSSSPLTT
TTTTTSNKK
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgtcaagacatagatttttaaagaatatggatggtgatgactttgaagattttaaagag
gaagatgaccttggagaatatgatgatgaagtctatgatgtttatgatgtagttgttgaa
aaattccccgatattacatatccagagattgaaaaagttttaatggattttgattacaat
gttgatgatgcaattgattttatattaaatgggggtttaaataataaaggaaagaaaaaa
aataataaaaaaccaccacaagcagttaatattattaacaacaacaacaataataaaaaa
tcggaaccagtaaacacaaataaatcaacttcaaaaggtcaaagacgaccaagaaaatcc
acatcagaaaataataatagtaataataatagtaataataacgatgatgatgatgataat
aataaaaataaaaataataataataataataaaaataataatggatataaaccgtcatct
ttagcacaagatttatcagctatcacaaatacaatatctaatattaaaataatcaatgat
aaggagttttcatttcaatcactttataaaaataataaggataatgtaacaaattcatta
aaaacattatcaattggtggaaataacaataataaagtaccagttgaatcaaaaacacca
tacaatacaccaataggaacaccaattaatgataaaaatttaccacattcaccaaaagaa
tcattaattgattcaataaatgcaacaacagttaataaaaatttaaatgtaaaacaacat
agtataaatagaaagaaagaattagaagagatggtacatgttgcattttcaagtagtgat
aataaaccacatttgaatatggtagtgattggacatgttgatgcaggtaaaagtacaaca
atgggacatatattatttaagttgggatatgtagataagagaaccatgtcaaagtttgaa
aatgagtcaaatagaatgggtaaatcatcatttcatttcgcatgggtattggatgaacaa
gaggaagaacgtgagcgtggtgtaactatggatgtttgtgtgcgttactttgaaacagag
catagaagaatcacactattggacgcaccaggtcacagagatttcataccaaatatgatc
agtggtacaactcaagcagatgttgcaatattattaattaacgcatcagaatttgaagca
ggtttctcagcggagggtcaaactaaagaacatgctttactcgcaaaatcattaggtatc
atggaattaattgtagcagtcaataaaatggattcaatcgaatgggatcaatcacgttac
gattacattgtagaaaccattaaaacctttttagttcatgcaaaattcaacgagaagaac
attagattcataccaatttccggtttcacaggtgagaatttaatcgatcgtcaagaatca
aaacttttgaaatggtatgatagcaaacaacctacccttatagagtgtatcgactcattt
agtgttggtgaacgtttattgaataaaccattcagaatgaacattagtgacgtatataaa
tcatcaagtaaaggttacgttgcagttggtggaaagattgaagctggtttattgggtaat
ggtgataagattttaatttcacctggtaatgatatttgtacaattaaatccattcgtaga
aataatctcgagtctgaatgggcagtcggtggtgataatgttgatttatcattggtcgta
gagaatccttcaattttacgtgttggttgtatccttagtgatccagaaaaaccaatacct
ctatcaaaacgtttcatcgctcaaatcgtcactttcactctaccaatcccaatgaccaat
ggttatcaagtggttttccatgctcactcaatggaagaacctgcaaccattacacgttta
attagtttattggattcaaatggtgccgtttcaaaaaagaatccaagatgtatttctgat
acttgtactgctttagtagaaattacattgggtagattatcttgtttagaactctatagt
tcctatagacaattaggtagattcactttaagaaatggtggtgttacaattgctgctggt
ttaatcactgaattttatgataatccacctaaaaaatcttcttcatcacctttaacaact
acaacaacaacaacatcaaataaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (58)   

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