KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0286645
Entry
DDB_G0286645      CDS       T00245                                 
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
  KO
K14408  cleavage stimulation factor subunit 3
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DDB_G0286645 (cstf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0286645 (cstf3)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     DDB_G0286645 (cstf3)
SSDB
Motif
Pfam: Suf TPR_14 HAT TPR_2
Other DBs
NCBI-GeneID: 8625734
NCBI-ProteinID: XP_637594
dictyBase: DDB_G0286645
UniProt: Q54LG7
Position
4:4781245..4784575
AA seq 1065 aa
MEDENKEVMDTSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPSQDTITSTTTTTTDNS
GPTTTVAVSPPTTTATAAVSPTPENQNVTTPTPISPSLSSVNVSPTTAVTITASPTTSTT
TTASPTTVAAPTTVGSTPTTTTASPLGNILSLNMPAVGKRLNVQIETLENRINNDMYDTE
AWTLLLNEVQSQPISIARDIYKRFLSVFPTAGRYWKLYVEEEMKEKNYDIVEKIFFENLR
SVKNVEFWKSYIAYIKQIKGDKVENREEIIKAFEFALESIGMDISSTSIWTDYIQFLKDE
KASTQFEEGQKMTAIRKLYQRAIENPMHDLDNIYKEYEVYENSINKTLAKALLSDHQGKY
QHARNVYRDRKSLLEGILRNMLAKPPRSSDKEEHQVRLWRKLITYERSNPQKFDAVTLRN
RVIATYNQCLLCLYHYPDIWYEAATYLADCGDSSGCIAMFDRSLIALPKNLFIHFAYADY
LESQKKQPQAKEIYEKILQANPEPLVWIQYMKFSRRTERIEGPRKIFKRAKSTPDCTYHV
YIALGLIEYYINQDTRMARDIFEIGLKKFPSEIAFVNFYIEFLTNLNEENNTRVLFEKLL
TWPSLEKSESIWRKFLDFEYRQNQDVSSILKLEKRYQVTVNSNTDKSGVLQALNRYKFLN
LWSCHPTEIEIITKNILDDHSDQNKDDHHSHSHAHHHPPHSRHNANKDSTEKDQGAIDGK
EGAVAAKLHKKGKGKEIKPVPQIESKPTFSTIIPTSNWKVKKPDITQMVPFRGEIGKFTQ
SSVVSIPQQQQQQQQPTPISSQPISQQQQQQQQQPTPLSSQPISSQPSLQTNTQQQGNQP
PNRSGLPDFIFYFLQNLPSNQSFMGPYIDPEQLIGIIRDTPLPIQFLNQQQLQLQQQQLQ
QQQLQLQQQQQLQLQQIQQHQQQQQQANRTSPTLSNETLIIPNKPQQPQQPQPQQTQTHK
RKQPDDESNNEQQQQPPPQQPPQQQQEQQQQPPTTTTATTSVVSPITTLNSTPISAPTTV
SPITTTTIPSTSSPTTTSTTVTAKSQQSASDIYRKRQANKLSKKS
NT seq 3198 nt   +upstreamnt  +downstreamnt
atggaagatgaaaataaagaagttatggatacttcacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
cagcaacaaccatcacaagatactataacttcaacaacaacaacaactacagataatagt
ggaccaacaacaacagtagcagtttcacctccaacaacaacagcaacagcagcagtttca
ccaacaccagaaaatcaaaatgttacaacaccaacacccatatcaccaagtttatcaagt
gttaatgtttcaccaactactgcagtaactattacagcttcaccaacaacttcaacaact
actacagcttcaccaacaactgtagcagcaccaacaacagttggtagtacaccaactaca
acaacagcatcaccattaggtaatattttatcattaaatatgccagcagttggtaaaaga
ttaaatgtacaaattgaaacattagaaaatagaataaataatgatatgtatgatactgaa
gcatggacacttttattaaatgaagttcaatcacaaccaatttcaattgcaagagatatt
tataaaagattcttatctgtatttccaactgcgggtagatattggaaattatatgttgaa
gaagaaatgaaagaaaaaaattatgatatagttgaaaaaatattttttgaaaatttaaga
agtgtaaagaatgttgaattttggaagagttatatagcatatattaaacagattaaaggt
gataaagttgagaatagagaagagattattaaagcatttgaatttgcattggagagtatt
ggaatggacatttcatccacatcgatttggacagattatattcaatttttaaaggatgaa
aaggcaagtacacaatttgaagagggtcaaaagatgacagcaattagaaaactatatcaa
cgtgcaatagagaatccaatgcatgatttggataacatttataaagagtatgaagtttat
gaaaattcaatcaataaaaccttggcaaaggcattgttatccgatcatcaaggcaaatat
caacatgcaagaaacgtctatagggatcgtaagtccctattggagggtattctaaggaac
atgttggcaaagccacctagatcatccgataaggaggaacatcaagttagactatggaga
aagttaataacctatgaacgatcaaatccgcagaaattcgatgctgttacattgagaaat
cgagtaattgccacctataatcaatgtttgctttgtctttatcattatccagacatttgg
tatgaggctgccacttatttagccgattgtggtgattcaagtggttgcattgcaatgttt
gatcgttcgttgattgccttaccaaagaatcttttcatacattttgcatatgccgattat
ttagagtcacaaaagaaacaacctcaagctaaagaaatctatgaaaagatattacaagcc
aatccagagccattggtatggatacaatatatgaaattctcaagacgtaccgaaagaatt
gaaggaccacgtaaaatatttaaacgtgctaaatcaacaccagattgcacctatcatgtt
tacattgcattgggtttaatcgaatattacatcaatcaagacacaagaatggcaagggat
atctttgaaattggtttaaagaaattcccatcggaaattgcttttgtcaatttctacatt
gaatttctaaccaatctaaatgaagaaaacaatacaagagtactctttgagaagctatta
acttggccatcattggagaaatcggaatcaatttggagaaaattcttagattttgaatat
cgtcaaaatcaagatgtttcatcaattctaaagttagagaaacgttatcaagtgactgta
aattcaaataccgataaatctggtgtacttcaagcattgaatagatataaatttttaaat
ctttggagttgtcatccaactgaaattgaaatcattacaaagaatatcttggatgatcat
tcagatcaaaataaagatgatcatcattctcattctcatgctcatcatcatccccctcat
tcacgtcataatgcaaataaagattcaactgaaaaagaccaaggagctattgatggtaaa
gaaggagcagtagctgctaaacttcataaaaaaggtaaaggtaaagaaattaaaccagta
ccacaaattgaatcaaaaccaactttttcaacaattatacctacttcaaattggaaagta
aaaaaaccagatataactcaaatggtaccttttcgtggtgaaattggtaaattcactcaa
tcaagtgtagtttcaataccgcaacaacaacaacagcaacagcaaccaacaccaatatca
tcacaaccaatatcacaacaacaacaacaacaacaacagcaaccaacaccattatcatcg
caaccaatatcatcacaaccatcattacaaactaatactcaacaacaaggtaatcaacca
ccaaatagaagtggtttaccagattttatattttatttccttcaaaatttaccttcgaat
caatcatttatgggaccatatatagatcctgaacaattgattggaattattagagatact
cctttaccaatacaatttttaaatcaacaacaattacaattacagcaacaacaattacag
caacaacaattacaattacaacaacaacaacaattacaattacaacaaatacaacaacat
caacaacaacaacaacaagcaaatagaacctcacccactttatcaaatgaaactttaatt
attcctaataaacctcaacaacctcaacaacctcaacctcaacaaacacaaactcataaa
agaaaacaaccagatgatgaatcaaataatgaacaacaacaacaaccaccaccacaacaa
ccaccacaacaacaacaagaacaacaacagcaaccaccaacaacaacaacagcaacaacg
agtgtagtatcaccaataacaacactaaattcaacgccaatatcagctccaactacagta
tctccaatcactacaacgacaatcccatcaacaagttcaccaactacaacatcaacaact
gtaactgctaaatcacaacaatcagcttctgatatatacagaaaacgacaggcaaataaa
ctttctaaaaagtcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (74)   

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