KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0290483
Entry
DDB_G0290483      CDS       T00245                                 
Symbol
abcE1
Name
(RefSeq) 4Fe-4S ferredoxin, iron-sulfur binding domain-containing protein
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddi03009]
    DDB_G0290483 (abcE1)
Ribosome biogenesis [BR:ddi03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    DDB_G0290483 (abcE1)
SSDB
Motif
Pfam: ABC_tran RLI SMC_N AAA_21 Fer4 RsgA_GTPase AAA_22 Fer4_6 AAA AAA_16 VapE-like_dom NACHT nSTAND3 TsaE Rad17 Fer4_2 AAA_24 Fer4_9 AAA_28 AAA_30 SRP54 Fer4_21 Fer4_10 AAA_33 Fer4_4 Zeta_toxin Fer4_16 AAA_19 AAA_7 AAA_23 Fer4_7
Other DBs
NCBI-GeneID: 8627699
NCBI-ProteinID: XP_635627
dictyBase: DDB_G0290483
UniProt: Q8T8P2
Position
5:complement(4209815..4211793)
AA seq 603 aa
MADDAIRIAIVNADRCKPKKCSQECKKYCPVVKMGKLCIEVKPTSKMSYISEELCNGCGI
CVKKCPFEAIQIINLPKNLTKETTHRYGPNSFKLHRLPTPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGLYDNPPTWDEIISFFRGNELQSYFTRILGEDLKALIKPQYVDNLSKAV
TGVVSSILDAKSEKDNKQEMIDCLDLKEALHKTVPVLSGGELQRFAIAVVAIQKADVYMF
DEPSSYLDVKQRLKAAQVIRGLIQSQNYIIVVEHDLSVLDYLSDFICCLYGAPGAYGVVT
LPFSVREGINIFLSGYIHTENMRFRKDALTFKFSETAENEEEIKKHCNYKYPNMTKTMGT
FKLEIKAGQFTDSEIIVMLGQNGTGKTTFIRMLAGHMPSDTDAQVPELNVSYKPQKIDPK
FPGSVRELINKRICNTFLHPQFQSDVVKPLNIENIIDNQVLNLSGGELQRVAIVLCLGQP
ADIYLIDEPSAYLDSEQRIIVSKVIKRFILHAGKSGFIVEHDFIMATYLADRVIVYDGIP
GVSCVANTPQSLLTGMNSFLKSLEITFRRDPSNFRPRINKLNSIKDNEQKAAGNYFFLDN
VDE
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcagatgatgcaattagaatagcaattgtaaatgcagatagatgcaaaccaaagaaa
tgtagtcaagaatgtaaaaagtattgcccagtcgtaaagatgggtaaactttgtattgaa
gttaaaccaacatcaaagatgtcatacatttcagaagaactttgtaatggttgtggtatt
tgtgtaaagaaatgtccattcgaagcaattcaaatcattaatttaccaaagaatttaacc
aaagaaaccacacatcgttatggtccaaacagtttcaaacttcatagattaccaacacca
cgtccaggtcaagtattgggtttagtaggtaccaatggtattggtaaatccactgcctta
aaggttttagctggtaaattaaaaccaaatttaggtctctacgataatccaccaacttgg
gatgaaatcatttctttcttccgtggtaatgaacttcaatcctatttcactagaattctc
ggtgaagatttaaaagcactcatcaaaccacaatacgttgataatctttcaaaggctgtc
actggtgtagtctcaagtatcctcgatgctaaatctgaaaaagataataaacaagaaatg
atcgattgtcttgacttaaaagaagcacttcataaaactgtaccagtactttcaggtggt
gaattacaacgttttgcaattgctgttgttgcaattcaaaaagccgatgtttatatgttt
gatgaaccatcaagttatcttgatgttaaacaaagattaaaggcagcacaagttattaga
ggtttaattcaatcacaaaattatattattgtagttgaacatgatcttagtgttttagat
tacttatcagattttatttgttgtctttatggagcaccaggtgcttatggtgttgtaaca
ttaccattctctgttagagaaggtattaatattttccttagtggttatattcacacagag
aatatgagattccgtaaggatgcattaacctttaaattctcagagacagcagagaatgaa
gaagagatcaagaaacattgtaactacaaatatccaaatatgaccaaaacaatgggtacc
ttcaaattggaaattaaagcaggtcaattcacagattctgaaatcatcgttatgttgggt
caaaacggtaccggtaagaccacctttatcagaatgttggctggtcatatgccatccgat
actgatgctcaagttccagagttgaatgtcagttacaaaccacaaaaaatcgatccaaaa
ttcccaggttccgttagagaattgattaataaacgtatttgcaacactttccttcatcca
caattccaatccgatgtcgttaaaccattaaacattgaaaacatcatcgacaatcaagta
ctcaatttatctggtggtgagttacaacgtgttgccatcgttttatgtttaggtcaacct
gctgatatctatctcattgatgaaccatccgcttatttggattctgaacaacgtattatc
gtctctaaagtcatcaagagattcattcttcacgctggtaaatctggtttcatcgtagag
cacgatttcattatggccacttatttagctgatcgtgtcatcgtttatgatggtattcca
ggtgtctcttgtgttgctaatactccacaatctctcctcactggtatgaactctttcctt
aaatctctcgaaatcactttccgtcgtgatccatccaatttccgtccaagaattaacaaa
ttaaattcaatcaaagataatgaacaaaaagctgctggtaattatttcttccttgataat
gttgatgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (97)   
   KEGG ORTHOLOGY (1)   
   RefGene (92)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (134)   

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