KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0290909
Entry
DDB_G0290909      CDS       T00245                                 
Symbol
rpa49
Name
(RefSeq) hypothetical protein
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DDB_G0290909 (rpa49)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0290909 (rpa49)
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     DDB_G0290909 (rpa49)
SSDB
Motif
Pfam: RNA_pol_I_A49 Rhabdo_NV
Other DBs
NCBI-GeneID: 8627890
NCBI-ProteinID: XP_635474
dictyBase: DDB_G0290909
UniProt: Q54FE8
Position
5:4737794..4739261
AA seq 375 aa
MSNLTVNVIEEKNLGDNKPCVLKFSQGLPPLSFIEKEPEFISMSTKNKRHRVVLTNTDQL
EYESEDKDSKYAKYAIGIFDKNTKQLKIVPTKIQTMNQSVIGYTLTLDSSSVISREERYD
KIKKLADSFGSKITKKKMQKMEMENVENLDYEKTTKSIDAVKNELADIESNEKPFDLPDF
DAETNDVRKIYNIEAILPPRIFFGLNHQPFLDIISKTSEAPSYLPEYFKDQLKRFEDIKD
EEKVVYNCKLLTFMWYSMILMKSKGGHEPLIKEGCTSEVINFLVSIFGSKINHKKYNISQ
DDKLKIYNYLAIFALKLEDFQITDIKSLAQSLSLTSSSFEKHFTRVGCKVVRIGSEKRSV
RLEAPLKLPKARFSN
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgtcaaatttaacagttaatgttattgaagaaaagaatttaggagataataaaccatgt
gtattaaaattttcacaaggtttaccaccactttcattcattgagaaagaaccagaattc
attagtatgagtacaaagaataaaagacatagagttgttttaaccaatacagatcaatta
gaatatgaatcagaggataaagattcaaaatatgcaaaatacgcaattggtatctttgat
aaaaatacaaaacaattaaaaattgtaccaactaaaatacaaactatgaatcaatctgtt
attggttataccttaactttagattcttcttctgtaatatcaagagaagaacgttatgat
aaaattaagaaattggcagacagttttggttctaagattacaaagaagaagatgcaaaaa
atggagatggaaaatgtagaaaacttagattacgaaaaaacaactaaatcaattgatgct
gttaaaaatgaattggctgatattgaatcaaatgagaaaccatttgatttaccagatttt
gatgcagaaacaaatgatgttagaaagatatataatattgaagcaattttgccaccaaga
atattctttggtttaaatcatcaaccatttttagatattattagcaaaacatcagaagca
ccatcatatttaccagaatactttaaagatcaactcaaaagatttgaagatattaaagat
gaagaaaaagttgtttataattgtaaacttttaacctttatgtggtattcaatgatttta
atgaaatctaaaggtggtcatgaaccattaattaaagaaggttgtacaagtgaagttatt
aatttcttagtttcaatatttggtagtaaaatcaatcataagaaatataatatttctcaa
gatgataaattaaagatttacaattatcttgcaatctttgcattaaaacttgaagatttc
caaatcactgatattaaatcattggcacaatcattatcactcacttcaagttcttttgaa
aaacatttcactcgtgttggttgtaaagttgttagaattggttctgaaaagagatctgtt
agacttgaagcacctttaaaattaccaaaagcaagatttagcaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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