KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0291752
Entry
DDB_G0291752      CDS       T00245                                 
Symbol
smc1
Name
(RefSeq) structural maintenance of chromosome protein
  KO
K06636  structural maintenance of chromosome 1
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ddi03036]
    DDB_G0291752 (smc1)
Chromosome and associated proteins [BR:ddi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    DDB_G0291752 (smc1)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    DDB_G0291752 (smc1)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_15 AAA_29 Antig_Caf1
Other DBs
NCBI-GeneID: 8628307
NCBI-ProteinID: XP_629977
dictyBase: DDB_G0291752
UniProt: Q54E85
Position
6:688164..692478
AA seq 1373 aa
MGISILKIQNFKSYKGNPLIGPFKDFSCVIGPNGRGKSNIMDAIIFVLGHNSSQIRSTKL
NELVNTHIVTDKNNNEGGDNSTYVAINFNHQGNNYRFSRKIIGNGSQYFFEQTQVSAEQY
QKHLKDIGIDIGTKNFFVFQGDVESIATQNPKQISAFIDDISGSRALKFEYDRLLGEKSK
CEDDVFASYAKRKTIAFEKEQYKEQWTEVKEYQSMQDRVDSLKTDQQLAKLYQTTKEMRK
EQKLLDESKQQIQSIQSDEMKPLEQQYTQTSKNQASLHKEVVQLEDDISRLIKGKKKKGS
DQYSAEEEIKYISEKIKKTKLILSKAENSRSKQIQEIDQLRNELNEFTEQLENLDDEKEV
AETGLSIKMDHQQIEEYNQLKLQSGKETSGLKIKYDQLSREHKIEQDQHQQLTYRLEEFE
TMKKKFQESKEKFQNQKDIEQSNFQDLEQKLKESEKELVQCTTRFNETQQRQQNLNNDLE
RIQYSLSDLKSLKSESQRDRQFNQTVETLKSIFPGVKGKLMDLCEPSQRKYATALTLTMG
KLMDAIIVDTEETLIGCVRYLKEQLLGVATFISLDRLQMVKPINQQLRQISGGGGGSTAK
LLFDCLKIQKGIEDAVLYALGNTVVCESLAEAKLLAFGGKDRVKVITIQGIRITKSGLMS
GGGLSSIKSKSSQWDTKRVEELKKQRDTILAELSDVIQLNEIFNQRQQLTSQVHQLKSDY
SLSKSKIELLNDRLKKNQQELETNEKVINETIIPELSELNETLAKRKTQLDQLQSEINSI
EERYFSGFSKKFGVDNIREYEDNRLAKIQENIQKRLSLTESISVIQSRLDYEQGREIDNE
IKQLSEELNANEKILDQELEHKKENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDL
KKQLSTFNNQITDIEKLSNRHDFNITKLRGVYHQILIETRNEDIRLPILQFKGKEIDQGN
NNNNNNNNNNNNNNNNNNDKSEGETEDNNKKQKNKDSEAEVDESAVSEGENVKKPKKPTI
KKKKSSIKRKRETNKGDQEDNQEEDEEDEDDIFNESDVEENEKPNILQDIIKDITQAMVQ
DDILDIYEDEASIKFNYSSLKKRVFVDQKTYEEYLRKLTIDIETIGKEMKRVMPNYKAYE
HLVDVSDKLKKVRKELNQARDNAKTKIDSFNRVRDQRKQLFLRAFKRIAKNLTSIYSELT
RELEPPYHRGSAHLALEDTENPFNSGVRFTVIPPNKRFQEMDQLSGGEKSVAALAFLFST
HGLKSTPFMILDEIDAAFDSVNVLKLVRYVRHKASKDLQFLVISLKEQFFVHSDLLVGVC
REPDSQSKSFHLLLEEFPESDEAKKALISKGDDETETDGKTSATSGSSESEND
NT seq 4122 nt   +upstreamnt  +downstreamnt
atgggtatatcaattttaaaaattcaaaattttaaatcatataaaggtaatccccttatt
ggtccattcaaggatttttcatgtgtaattggtcccaatggtaggggaaaatcaaatatt
atggatgctatcatctttgtattaggccataactcttctcaaattagaagtacaaaatta
aatgaattagttaatacacatattgtaacagataaaaataataatgaaggtggtgataat
tcgacttatgttgcaattaattttaatcatcaaggtaacaattatagattttcaagaaaa
attattggtaatggatcacaatatttttttgaacaaactcaagtttcagcagaacaatat
caaaaacatttaaaagatattggtattgatattggtacaaagaatttctttgtatttcaa
ggtgatgttgagagtatagctacacaaaatccaaagcaaatttcagcatttattgatgat
atctctggtagtagagcattgaaatttgagtatgatagattattgggtgaaaagtctaaa
tgtgaagatgacgttttcgcatcatacgctaaaagaaaaacgatagcattcgagaaggag
caatacaaggagcagtggaccgaggtgaaagagtaccaatccatgcaggaccgagtggac
tctttgaaaactgatcaacaattagctaaactttatcaaaccaccaaagagatgagaaag
gagcaaaaactattagacgaaagtaaacaacaaatccaatctatccaatcggatgaaatg
aagccattggaacaacaatacacacagactagtaagaaccaggcgtcattgcataaagag
gtggtgcaattggaggatgatatctcgaggttgataaagggcaagaagaagaaaggctcc
gatcagtattctgccgaagaggaaattaagtatatttcagagaaaatcaagaaaaccaaa
ttaatcctatcaaaagctgaaaacagtcgtagtaaacaaatacaagagattgatcaactt
cgtaatgaattaaatgagtttactgaacaattggagaatctagatgacgaaaaggaggtg
gcagaaactgggctatcaataaagatggaccatcaacaaattgaagaatacaatcaattg
aaattgcaatcaggtaaggaaacctctggtttaaagattaaatatgaccaactatcgaga
gagcacaaaattgaacaggaccaacaccaacaactcacctatagattggaggagtttgaa
actatgaaaaagaaattccaagaatctaaagagaaatttcaaaatcaaaaagatattgaa
caatcgaatttccaagatttagaacagaaattaaaagagtcagagaaagaactcgtacaa
tgtaccactagattcaatgagacacaacaacgtcaacaaaatttaaataatgatttagag
cgtattcaatatagtctttccgatttgaaatcattgaaatctgaaagtcaacgtgataga
caattcaatcaaaccgttgaaactttgaaaagtattttcccaggtgttaaaggtaaacta
atggatttatgcgaaccttcacaacgtaaatatgcaaccgcattgactctaacaatgggc
aaactaatggatgccatcatcgttgacactgaagagactctaattggttgtgtacgttat
ttaaaggagcaattacttggtgttgcaacatttataagtttagatcgtttacaaatggtt
aaaccaattaatcaacagttacgtcaaattagtggtggtggtggtggtagtacagctaaa
ttattattcgattgtttaaagattcaaaaaggtatagaagatgctgtattgtatgcattg
ggtaatacagtggtttgtgaaagtttagcagaggcaaagttattggcatttggtggtaaa
gatcgtgtaaaggttataactatacaaggtattagaatcacaaaatcaggtttaatgagt
ggtggtggtttatcatcaattaaatccaaatcatcacaatgggatactaaacgtgttgaa
gaattaaagaaacaaagagacaccatattggcagaactatccgatgtaatccaattgaat
gagattttcaatcaacgccaacaattgacaagtcaagtacatcaattgaaatcggattat
tcattatcaaagagtaaaattgagttactcaatgatagattgaaaaagaatcaacaagaa
ttggaaaccaatgaaaaggtaatcaatgaaacaatcattcccgagttatcggaattgaat
gaaacattggcaaaacgtaaaactcaattagatcaactacaaagtgaaatcaattcaata
gaggagagatatttcagtggattctcaaagaaatttggtgttgacaatatcagagagtat
gaagataacaggttggctaaaattcaagaaaacattcaaaagagattatcattaactgaa
tcgatctctgtgattcaatcacgtttagactatgaacagggtagagagattgataatgaa
attaaacaactctctgaagaattgaatgcaaatgaaaagatattagatcaagaattggaa
cataagaaagagaatgatgaaaaagagaaacaattcaaagagaatctatccgatctacaa
aaacaacatactgaaaagaaatcacaattagataaaatgaatataaccattaaagatttg
aaaaaacaattatcaacttttaataatcaaatcactgatattgaaaaattaagtaatcgt
catgattttaatattacaaaacttcgtggtgtttatcatcaaattttaattgaaactaga
aatgaagatattcgtttaccaattttacaatttaaaggtaaagaaattgatcaaggtaat
aataataataataataataataataataataataataataataataataataatgataaa
tctgaaggtgaaactgaagataataataaaaaacaaaaaaataaagatagtgaagctgaa
gttgatgaaagtgctgtaagtgaaggtgaaaatgttaaaaaaccaaagaaaccaacaatt
aaaaagaaaaaatcatcaataaaaagaaaaagagaaacaaataaaggtgatcaagaagat
aatcaagaagaagatgaagaagatgaagatgatatatttaatgaatcagatgttgaagaa
aatgaaaaaccaaatattttacaagatataattaaagatataacacaagcaatggtacaa
gatgatattttagatatttatgaagatgaagcatcaattaaattcaattattcgtcattg
aaaaaacgtgtatttgttgatcaaaaaacttatgaagaatatcttagaaagttaacaatc
gatattgaaaccattggtaaagagatgaaaagagttatgccaaattataaagcctatgag
catttggttgatgttagtgataaattgaaaaaagttagaaaagagttaaaccaagctaga
gacaatgcaaaaacaaagatagactcattcaatcgtgttagagaccaaagaaaacaattg
tttttaagagcgttcaagaggattgcaaagaatctcacttcaatctattcagagttgaca
agagagttggaaccaccttatcataggggttcggctcatttggctttggaagacactgaa
aatcctttcaactctggtgtaaggttcactgttatcccaccaaataaaagattccaagag
atggatcaattgagtggtggtgagaaatcagtggctgctttggctttccttttctcaact
catggcttgaaatcaactccatttatgattctcgatgaaatagatgccgccttcgatagt
gtaaacgttttgaaattggtgcgttatgttagacataaagcaagtaaagatcttcaattc
ttggtaatctctttgaaagaacaattctttgtccactctgatcttttagttggtgtttgt
agagaaccagattcacaatcaaaatctttccatttacttttagaagaattccctgaatct
gatgaagcaaagaaagctttaatctcaaaaggtgacgatgaaactgaaactgatggtaaa
acttctgcaacttctggtagtagtgaaagtgaaaatgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (76)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (89)   

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