KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0293218
Entry
DDB_G0293218      CDS       T00245                                 
Symbol
vps35
Name
(RefSeq) vacuolar sorting protein 35
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    DDB_G0293218 (vps35)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ddi04131]
    DDB_G0293218 (vps35)
Membrane trafficking [BR:ddi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    DDB_G0293218 (vps35)
SSDB
Motif
Pfam: Vps35 CowN
Other DBs
NCBI-GeneID: 8629124
NCBI-ProteinID: XP_629242
dictyBase: DDB_G0293218
UniProt: Q54C24
Position
6:2686279..2688810
AA seq 781 aa
MMKKNKPTVAQTLSPEEEQAKFFEEAKNNVMIQGHHMKLSLDNSKLMDALKYASNIINEL
RTSLLSPKSYYALYLVAFDYLQYLNTYLYEEKHGKKMIELYEVVQHAGNVLPRLYLLITV
GSVYIKTKQAPAKDVLKDLIEMCRGVQHPTRGLFLRHYLSEVTKDKLPDIDSSVENGTVM
DSIDFIIQNFTETNKLWVRMQHQAPTKDRERRENERLELRLLVGKNLSRLAQLDGVDQKT
YSEVVLPKVVEQIINCKDKIAQQYLMEILIQVFPDEFHLATLDIILQTCAQLQSGVDVKT
IIASLIDRLANFATRNADLVPDNIKIFDIFFNNVKEIIQARPNMELQDILGLHVSLLNLT
LKCYPTNKDNANEVLGLCQSIIVNKAKEDINKPTCVKQIIQLLQIPLDVFKNVLVVLKLS
NYQPLISCLSYNNRKKVSLDIVNNTINNSTIIEEPEAVNNLLETIQTLIKDEQDQPDMDD
IDKEDFQEEQNKVASLIHLFDSEDPEKLFKIYIIARGHFGKGGPHRIRHTLVPLVFCSLR
FIRNFKQQVDSGVISLDENKWIAIGSKIFTFVSETIKALADIKLADLSFRLYLQALQTFD
HCGLVSRVKELAIKALLIFQEDIADFKAQVMALQLLISTLNSLSIPNEEIYESLAAQTIK
QASRLLLPQDQAKLISTCSHLFWVDNPSRQYQNPDSVLQALKKALSIISNESSPGLGTFV
DILNECLFYCDKETDAVPIQFVSDLVELIRTTHVKEADPALPYLQNTIKYIQSQNYKGIS
I
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgatgaaaaaaaataaaccaacagtagcacaaactttatcaccagaagaagaacaagca
aaattctttgaagaagctaaaaacaatgttatgattcaaggtcatcacatgaaattatct
ttggataactcaaaattaatggatgcactcaagtatgcctcaaacattatcaatgaactc
cgtacaagtttactttcaccaaaatcatattatgctctctatttagttgcttttgattat
cttcaatacttgaatacttatctctatgaagagaaacatggtaagaaaatgattgaactt
tatgaagttgtacaacatgctggtaatgttttaccaagattatatttattaattacagtt
ggatcagtttatattaaaactaaacaagcaccagcaaaagatgtattaaaagatttaatt
gaaatgtgtagaggtgttcaacatccaacaagaggtttatttttaagacattatcttagt
gaagttaccaaagataaattaccagatattgattcatccgttgagaatggtacagttatg
gattcaattgatttcatcattcaaaatttcacagagactaataaactttgggtacgtatg
caacatcaagctccaaccaaagatagagagagaagagagaatgaacgtttagagttaaga
ttattggtcggtaagaatttatcacgtttagcacaactcgatggtgttgatcaaaaaaca
tatagtgaagtggttttaccaaaggtcgtagaacaaatcatcaattgtaaggataaaatc
gctcaacaatatttaatggaaatcttaattcaagtattcccagatgaatttcatttggct
acactcgatattattcttcaaacttgtgctcaacttcaatctggtgttgatgttaaaact
atcattgcttcactcattgatagacttgctaactttgcaactcgtaatgctgatcttgtt
ccagataatattaaaattttcgatatctttttcaataatgttaaagaaattattcaagca
agaccaaatatggaattacaagatattttaggattacatgtatctttattaaatttaaca
cttaaatgttatccaactaataaagataatgctaatgaagtattaggattatgtcaatca
attattgttaataaggccaaagaagatattaacaaaccaacatgtgttaaacaaatcatt
caattattacaaattccattggatgtattcaagaatgtattggttgtattgaaattgagt
aactatcaaccattgatttcatgtttatcatataacaatagaaagaaggtttcattggat
attgtaaacaataccatcaacaatagtacaatcattgaagagccagaagcagttaacaat
ctcttggagaccattcaaaccttgatcaaggatgaacaagatcaaccagatatggatgac
atcgataaggaagacttccaagaggaacaaaataaagtcgcctcactcattcatctcttt
gatagcgaagatccagagaaactattcaagatttacattattgctcgtggtcactttggt
aaaggtggtccacatcgtattagacatactttggttccattggtattctgttctcttcgt
ttcattcgtaactttaaacaacaagtcgatagtggtgtcatcagtttggatgaaaataaa
tggattgcaattggttcaaagattttcacctttgtcagtgaaaccatcaaagctttggcc
gatatcaaattggccgatcttagctttagattataccttcaagcactccaaacctttgac
cactgtggtttggtctctcgtgtcaaagaattggccatcaaggctctcttaatcttccaa
gaagatatcgccgatttcaaagctcaagttatggcccttcaattgttaatctctactctc
aatagtttaagcattccaaatgaagagatctatgaatccttggccgcccaaaccattaaa
caagcttctcgtcttctcttaccacaagatcaagcaaaactcatctctacttgttcacat
ttattctgggttgataatccttctcgtcaatatcaaaatccagactctgtattacaagct
ctcaaaaaagctctctccattatcagtaatgaatcgagtcctggtcttggtacatttgtt
gacattttgaatgaatgtctcttctattgtgataaagaaactgatgctgttccaattcaa
ttcgtttcagatttggttgaattaattcgtactactcatgttaaagaagctgatccagca
ttaccatatttacaaaatactatcaaatacattcaatctcaaaattataaaggtatttca
atttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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