KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0283365
Entry
DDB_G0283365      CDS       T00245                                 
Symbol
rpb12
Name
(RefSeq) RNA polymerase I core subunit
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03020  RNA polymerase
ddi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DDB_G0283365 (rpb12)
  09124 Replication and repair
   03420 Nucleotide excision repair
    DDB_G0283365 (rpb12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0283365 (rpb12)
   03400 DNA repair and recombination proteins [BR:ddi03400]
    DDB_G0283365 (rpb12)
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DDB_G0283365 (rpb12)
  RNA polymerase III system
   RNA polymerase III
     DDB_G0283365 (rpb12)
  RNA polymerase I system
   RNA polymerase I
     DDB_G0283365 (rpb12)
DNA repair and recombination proteins [BR:ddi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DDB_G0283365 (rpb12)
SSDB
Motif
Pfam: DNA_RNApol_7kD MCM_OB zinc-ribbon_6 NCD3G HypA YjdM_Zn_Ribbon
Other DBs
NCBI-GeneID: 8624050
NCBI-ProteinID: XP_639117
dictyBase: DDB_G0283365
UniProt: Q54R66
Position
4:585874..586210
AA seq 46 aa
MPCLYICGECGAEHEIKPKEPVKCKDCTHRIMYKKRTDKMIQFEAR
NT seq 141 nt   +upstreamnt  +downstreamnt
atgccttgtttatatatctgtggtgaatgtggtgctgagcacgaaatcaaaccaaaagaa
ccagtaaaatgcaaagattgcactcatcgtattatgtacaaaaagagaaccgataaaatg
attcaattcgaagcaagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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