KEGG   Dokdonia donghaensis: I597_1676
Entry
I597_1676         CDS       T04309                                 
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
ddo  Dokdonia donghaensis
Pathway
ddo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ddo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I597_1676 (rhlE_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddo03019]
    I597_1676 (rhlE_2)
Enzymes [BR:ddo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     I597_1676 (rhlE_2)
Messenger RNA biogenesis [BR:ddo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     I597_1676 (rhlE_2)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Fe-ADH P-loop_SecA UvrD-helicase AAA_22
Other DBs
NCBI-ProteinID: ANH60580
UniProt: A0A0A2GX72
Position
1876319..1877596
AA seq 425 aa
MSFKSLGLSDALLKAVSEKGYTTPSPIQQKAIPKVLEGKDVLASAQTGTGKTAGFTLPML
HNLIANPRQGRRKVRALVLTPTRELAAQIYDNVREYSKYVDIKSTVIFGGVNQNPQVRTI
RQGVDILVATPGRLLDLENQGLLSLSDIEFLVLDEADRMLDMGFIHDIKKVLRLVPAKRQ
NLLFSATFNKDIKKLASSILTNPVLVEATPENTTAEKVDQKTYRVDKSRKTEMLIKFINE
GNWDQVLVFTRTKHGANRLSQKLDKAGITSAAIHGNKTQNARVKALAGFKSGKIRVLVAT
DIAARGLDIPLLPYVINYELPNVPEDYVHRIGRTGRAGASGQAISLVGVDEVAYVRGIEK
LLGEKLHSEVLEGFQPTDTLEQLKKEAAENKARHQQGRRNSRNSKPSGEKRNDKSNSRSG
RSRRR
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtcatttaaatctttggggctatctgacgccctgctcaaagctgtgagcgaaaaaggc
tatacaacgccatcacctattcaacaaaaagcaattccaaaagtactagaaggtaaagat
gttcttgccagtgctcaaacaggtaccggtaaaaccgcaggctttacattacctatgtta
cacaatcttatcgcaaacccgcgacaaggaagacgcaaagtaagagcgcttgtacttaca
ccaactagagagctagctgctcagatctatgataatgtgcgcgagtatagtaagtatgta
gatattaaatctacagtaatttttggcggagtaaaccaaaatcctcaagtacgtaccata
cgtcaaggagtagatatacttgtagcaacacctgggagactacttgaccttgagaatcaa
ggcctacttagtctttctgatattgagtttttagtgcttgatgaagcagaccgtatgctt
gatatggggttcatacacgatattaaaaaagtattacgattagtacctgcaaagagacaa
aacctgctttttagcgctacttttaataaagatattaagaaacttgcaagtagtatactt
acaaatccggtactagtagaagcaacaccagaaaatacaaccgccgaaaaagtagaccag
aaaacttacagagtagataagtctcgtaagaccgaaatgcttataaaatttattaatgaa
ggtaactgggatcaggtactggtatttacaagaacaaagcacggtgcaaaccgtcttagt
caaaaacttgataaagcaggaataacatctgcagctatacacggtaataaaacacaaaat
gcgagagtaaaagcactcgcaggttttaaaagtggtaaaataagagtgcttgtagcaaca
gatattgctgcacgtggtcttgatatccctttattaccttatgttataaactacgagctt
cctaatgtgccagaagattatgtacatagaataggtcgtacaggtagagcaggagctagc
ggccaggctatatctttagtaggggtagatgaggttgcttatgtacgtggtattgaaaaa
ctattaggagaaaaacttcatagcgaggtgctagaaggttttcaacctacagatacatta
gagcaacttaaaaaggaggcagccgaaaataaagcgcgtcaccagcaaggacgtcgtaat
agtcgtaatagtaaaccatctggtgaaaaaaggaatgataaatctaacagtcgttctggt
agatctagaagaagataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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