KEGG   Dickeya dianthicola: DDI_1001
Entry
DDI_1001          CDS       T05141                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
ddq  Dickeya dianthicola
Pathway
ddq00550  Peptidoglycan biosynthesis
ddq01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    DDI_1001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ddq01002]
    DDI_1001
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ddq01011]
    DDI_1001
Enzymes [BR:ddq01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     DDI_1001
Peptidases and inhibitors [BR:ddq01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   DDI_1001
Peptidoglycan biosynthesis and degradation proteins [BR:ddq01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   DDI_1001
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase Peptidase_S13
Other DBs
NCBI-ProteinID: ATO32169
Position
complement(995038..996249)
AA seq 403 aa
MKTVITSCFTKRIALGTLLAISASTFAYADDINLKTMIPAVPDIDAEAYILIDYNSGKVL
AEKNADTRRNPASLTKMMTSYVIGQAIKAGKIGPNDIVTVSKDAWATGNPDFQGSSLMFL
KPGDRVPVYMLNKGIILQSGNDACVAMADYVAGSQDSFVNLMNGYVKALGLQNTNFKTVH
GLDADGQYSSARDMALIGQALIRDVPDEYATYKEKEFTFNNIRQMNRNGLLWDSSLAVDG
IKTGHTASAGYNLVASATEGQMRLISAVMGGRTFKGRETESKKLLTWGFRFFETVAPLKT
GKEFASEPVWFGNNDRVSLGVGKDAYITVPRGRMKDLKASYVLTNTELHAPLAKNQVVGT
INFQLDGKVIDQRPLVVMNEVKEGGIFGRLFDYIKLMFHRWFS
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaaaacagtaatcacgtcttgttttaccaaacgtattgcgctcggcacgttgctcgcc
atcagtgcatccactttcgcctacgcagacgacattaatctgaaaaccatgattcctgcc
gtcccggatattgatgccgaagcgtacatcctgattgattacaactcgggtaaagtactg
gcggaaaaaaatgccgacacccgccgcaaccccgccagcctgaccaagatgatgaccagt
tacgtcatcggccaggctatcaaagccggtaaaatcggcccaaacgatatcgtgaccgtc
agtaaggatgcctgggctaccggcaaccccgattttcagggttcctcgctgatgttcctt
aaaccgggcgatcgcgtgccggtttatatgctcaataaagggattatcctgcagtccggc
aacgacgcctgcgtggcgatggccgattacgtggccggcagccaggattcgttcgtcaac
ctgatgaacggttacgttaaggctctggggctacagaacaccaacttcaaaacggttcac
ggtctggatgctgacgggcagtacagttcagcccgcgatatggcgctgattggccaggcg
ttgattcgcgacgtaccggacgagtacgccacctataaagaaaaagaatttaccttcaac
aatatccgccagatgaaccgcaacggcctgttgtgggacagcagcctggccgttgacggc
atcaaaaccggtcacaccgcctccgctggctacaacctggtggcttccgccactgaaggt
cagatgcgcctgatctctgcagtcatgggcggccggacattcaaaggccgcgaaacagaa
agcaagaagctgctgacctggggtttccgcttctttgaaacggtagcgccgctgaaaacc
ggcaaggaattcgcctccgagccggtgtggttcggcaacaacgaccgggtatcgctgggc
gtgggtaaagatgcctacatcaccgttccgcgcggccgcatgaaagacctgaaagccagc
tatgtgctgaccaatacggaactacacgcgccgctggctaaaaatcaggtggtcggcacc
atcaacttccagttggacggcaaagtgatcgatcagcgcccgctggtggtgatgaacgaa
gtcaaagaaggcggtattttcggacgtctgttcgactacatcaaactgatgttccaccgc
tggttcagttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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