KEGG   Devosia sp. H5989: XM25_11160
Entry
XM25_11160        CDS       T04003                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
deq  Devosia sp. H5989
Pathway
deq00470  D-Amino acid metabolism
deq00550  Peptidoglycan biosynthesis
deq01100  Metabolic pathways
deq01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:deq00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    XM25_11160
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    XM25_11160
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    XM25_11160
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:deq01011]
    XM25_11160
Enzymes [BR:deq01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     XM25_11160
Peptidoglycan biosynthesis and degradation proteins [BR:deq01011]
 Precursor biosynthesis
  Amino acid ligase
   XM25_11160
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 ATP-grasp GARS_A CbiA
Other DBs
NCBI-ProteinID: AKR56344
Position
complement(2282021..2282941)
AA seq 306 aa
MTKHVAVLMGGWSNERPVSLSTGAECAGALRRAGYRVTEVDVDRDIAHVLEKLKPDVAFN
ALHGTFGESGMIQGFLELIQLPYTHSGVLASALAMDKHQSKIMFKAAGIPVTDHVIMNRA
DVARAHAMMPPYVVKPIADGSSFGVFIVKEDQSHPPQELLREDWNSGEEVMVERYIPGRE
LTCAVMGDVALGVTEIVTDLAFYNYEAKYAKGGSTHIVPAQVSPNIYDKVQKMALKAHAA
LGCRGVTRTDFRYNDKAGEDGELVCLEINTQPGMTQTSLVPEQAAAAGHSFEDLVTWMVE
DASCNR
NT seq 921 nt   +upstreamnt  +downstreamnt
atgaccaaacacgtcgccgtcctgatgggcggatggtccaacgagcggccggtttccctc
agcaccggggcagaatgcgccggggcgttgcggcgggccgggtatcgggtcacggaagtc
gatgtggatcgtgacatcgcccacgtgctcgaaaagctcaagcccgatgtcgccttcaat
gcgctgcacggcacgttcggcgagagcgggatgatccaggggttcctcgagctcatccag
ttgccctatacgcattcgggcgtgctggcctcggcgctcgcgatggacaagcaccagtcc
aagatcatgttcaaggccgccggcattccggtaaccgaccatgtgatcatgaaccgcgcc
gacgtcgcccgcgcccatgcgatgatgccgccctatgtggtcaagccgattgccgacggc
tcctcgttcggcgtcttcatcgtcaaggaagaccagagccatccgccccaggaactgctg
cgcgaggactggaattcgggcgaggaggtgatggtcgagcgctatatcccgggtcgcgag
cttacctgcgcggtgatgggggacgtggcgctgggtgttaccgagatcgtcacggacctg
gctttctacaattacgaggcgaaatacgccaagggcgggtctacccacatcgttccggcg
caggtttcaccgaatatttacgacaaagtgcagaagatggcgctcaaggcccatgccgcg
ctcggctgccggggcgtgacgcggacagacttccgctacaacgacaaggcaggcgaagac
ggtgagctcgtctgcctggaaatcaacacccaaccaggcatgacgcagacctcactcgtc
cccgaacaggcggccgccgccggtcactcatttgaggacctggtcacctggatggtggag
gacgcgagttgcaacaggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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