KEGG   Cavenderia fasciculata (cellular slime mold): DFA_02005
Entry
DFA_02005         CDS       T02668                                 
Symbol
utp13
Name
(RefSeq) WD40 repeat-containing protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DFA_02005 (utp13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dfa03009]
    DFA_02005 (utp13)
Ribosome biogenesis [BR:dfa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    DFA_02005 (utp13)
SSDB
Motif
Pfam: WD40 Utp13 ANAPC4_WD40 NBCH_WD40 BUD22
Other DBs
NCBI-GeneID: 14873704
NCBI-ProteinID: XP_004359966
UniProt: F4PRC1
Position
Unknown
AA seq 1252 aa
MTSISNKIVKRNINTDESTTTTTTTTTEKTTVTLDNNEIIRQRREMIESKKRKKTIIYYT
VIILFIVIFFLGTEVKMVESTTAMNRVIELNYTQIELVIKKSPPLPPPLAQINSSLLQHN
DSNIQATTPFLLLLYRDECSFSKQMIPIFDELSNIFPQIPHYRYNNKIPSSIGYSRLTPT
IVLVHKNHSSSLTTKTNIDNNNSGIDNQNNNNNNNNNNNNNNNNNNNNNNNNNNNNNISD
TKNMGIKYFRYTGIKSFGNLKQWIIESTKLNPINDDTQQQQQTNPTIEKEEEEEMSIDLS
KVKFVQVVDDEDLSDYEEEQEEEEEEEEETKVAKVDAETEEEKKMSQKRKLKSLFKPDYS
ISSLYTGGFITVSHDSKFIISTNGYTLCFTESDSGIEYCQPLKLDAKVSSFAINSKSNLL
VVALNNNIVQLYKLIYNDIDTTTTTTTTTTTTTTTTTTTTTTTTTTASTTSDDKEQQQQR
IEFKLEKQFKCGESPINSIDFHSSSVLVAIGSSDGIVQVWDVEKGYCTHQFKENYGVVSI
VKFHPKQLFIVAVSDDSKIRLWDLFGKNHFVLDNHLSVVSSLTFTNDSKLLVSAGRDKVI
NVWNIEKSIAAAASGNNAPNATTTIVTPQKTIPIFQELGGMIALPNRYYQNVESCQLPQE
FIEKINKTIIKLNGINQQTNTVNNLNIVVGGEDVLRAWCIETGECLWNDQGIEFKKKTQK
EMEKASEFLNNPNIITSVLCRGDLLLSITSEHNIMKFNTNTMERNGEIIGYNDEIVDIKY
IDQDNIAVATNSNEIRCYNLKTKQPKLLRGHENLVMSLDVSADGKTIVSASKDHTIRLWD
ANQHKCIAIGKGHTSEVTSVAISKKAGSNRFAISGSGDKTIKLWKLPNTDAKTTTTSQPL
LQVSKTVVAHEKDINCIAIAPNDKICASASQDGYVKIWNISDLSLVQSFKAHKRGIWYTE
FSPVDQCLLTCSADGTIKLWSLVDYTCLKTLEGHQTSVLRASFVTYGMQVISSSSDGLLK
LWTIKTSECVATFDEENAHQNSKVWSLAVNHNSKDKEHPQFITGGSDSKIIVWSDHTVTE
QEKHHRKQEEQILNQQMLDTSLLKKDYSRSLKLALILNQPHQSLRIFQTIVMEQDKQIEE
NNQDNNSLMKSVLSKLSTNDLLKCLKYIRDWNTNSRFVHVSQIVLYSILTLLKAEQLLSF
EKELATLLESMIPYNEKHFNRVDRIIQKTYLLDYTIASINPTLTSNNIFNKN
NT seq 3759 nt   +upstreamnt  +downstreamnt
atgacttctataagcaataaaatagtcaaaagaaatataaatacagatgaaagtacaaca
acaacaacaacaacaacaacagaaaaaacaacggttactctagataacaacgagatcata
agacaaagaagagaaatgatagaatcaaaaaagagaaaaaagactataatctactacaca
gttattatattgtttatagtcatattctttttggggactgaagttaaaatggtagaatct
accactgctatgaatagagtaatcgaactaaactatactcaaattgaacttgttataaaa
aaatctcctcctcttcctcctcctcttgctcaaatcaattcttctctactacaacacaat
gattcaaatattcaagcaacaactccatttctcttattgttgtatagagatgaatgtagt
ttctcaaagcaaatgataccaatatttgatgaattatcaaatatctttcctcaaatacca
cattatagatacaataataagattccctcatcgattggatattccagattaacaccgacc
attgttttggtacataaaaatcattcctcctctctaacaacaaaaaccaacattgacaat
aataatagtggtatcgataatcaaaataataataataataataataataataataataat
aataataataataataataataataataataataataataataataataatatttcagac
accaaaaatatgggtataaagtactttagatatactggtataaagtcatttggaaatctc
aaacaatggatcattgaatcaaccaaattgaatccaatcaatgatgacacccaacaacaa
caacagacaaaccctacgattgaaaaagaagaagaagaagagatgagcattgacctttca
aaagttaaatttgttcaagtagtagatgatgaagatttaagtgattatgaagaagaacaa
gaggaggaggaggaggaggaagaagagacaaaggtcgcaaaagttgatgcggaaacagaa
gaagagaaaaaaatgtcacaaaagagaaaattaaagtcattgtttaaaccagattactct
atatcatcattgtatactggtggttttattacagtatcacatgactctaaattcattata
tcaaccaatggatatactctatgttttacagagagtgacagtggtatcgaatattgtcaa
ccattaaaattggatgcaaaggtttcttcatttgcaatcaatagcaagtctaatctattg
gttgttgcattaaacaataatatagttcaattgtataaattgatttataatgatatcgat
actactactactactactactactactactactactactactactactactactactact
actactactactactactgcttctacaacctctgatgacaaagaacaacaacaacaaaga
atagaatttaaattggaaaagcaatttaaatgtggagagtcaccaatcaatagtatcgat
tttcattcatcaagtgtacttgtagctatcggttcttctgatggaatagttcaagtatgg
gatgtagaaaagggttattgtactcatcaatttaaagaaaattatggagttgtatctatt
gtgaaattccatccaaaacaattatttattgttgctgttagtgatgattccaaaattaga
ttgtgggatttatttggaaagaatcattttgtattggacaaccatctttcagttgtatca
tctttgacatttacaaatgatagtaaattattggtatctgcaggacgtgacaaggtaatt
aatgtttggaacattgaaaagagtattgctgctgccgccagcgggaataatgcaccaaac
gctacaaccaccatagtgacaccgcaaaagactataccaatattccaagaacttggagga
atgatcgctcttccaaatagatactatcaaaatgttgaatcatgtcaacttcctcaagag
tttattgaaaagataaacaaaacaattatcaaattaaatggaatcaatcaacaaacaaac
acagtaaacaatttgaatatagtagttggtggagaagatgttttaagagcatggtgtatc
gaaactggtgaatgcctttggaatgaccaaggtatcgaatttaaaaagaaaactcaaaag
gaaatggaaaaagcttctgaatttttaaataatccaaatattattacatctgttttatgt
cgtggtgatttattattatcaatcacatcagaacataatattatgaaatttaatacaaat
acaatggaaagaaatggtgaaattattggttacaatgatgaaattgttgatatcaaatat
attgatcaagataatattgctgttgcaacaaattcaaatgaaattagatgttataattta
aaaactaaacaaccaaaattacttagaggtcatgaaaatttagtaatgtcattggacgtt
tctgccgatggaaagacaatagtatcggcatcaaaagatcatactataagattgtgggat
gccaatcaacataaatgtattgcaattggaaagggacatacatccgaggttacaagtgtt
gccatctccaagaaagcaggatccaatcgatttgcaatctctggtagtggtgataaaaca
attaaattgtggaaactaccaaatacagatgccaagacaacaacaacatcacaaccacta
ttacaagttagtaaaacagttgttgcacacgaaaaggatatcaactgtattgcaattgca
ccaaatgataagatttgtgcatcggcatcacaagatggttatgttaaaatatggaatata
tcagacctttcattggtacaatcattcaaggctcataaaagaggtatttggtatacagaa
ttttcaccagtcgatcagtgtctcttgacctgttcggctgatggtaccataaagttgtgg
tcacttgttgattacacttgtctcaagacattagagggacatcaaacatcggttttgaga
gcatcttttgttacctatggtatgcaagtcatatctagtagtagcgatggtctcttgaaa
ttatggaccatcaagacgagcgaatgtgtagctacatttgacgaagagaatgctcaccaa
aacagcaaggtgtggtcattggcagtcaaccacaactccaaggacaaggaacatcctcaa
tttatcactggtggatccgattcaaagattattgtttggagcgatcatactgttacagaa
caggaaaaacatcaccgcaaacaagaagaacaaatcctcaaccaacaaatgttggatact
tcacttttaaaaaaagattattctcgatctttaaagttggctttgattttgaatcaacct
catcaatctttaagaatatttcaaacaattgtaatggaacaagacaaacaaatagaggaa
aataaccaagacaacaattctctaatgaaatcggttctttcaaaactttcaacaaatgat
ttgttaaagtgtctcaaatatattagagactggaatacaaattcaagatttgttcatgtc
tctcaaattgttttatattcaattttgactttattaaaagcagaacaattattatctttt
gaaaaagaattggctactcttttagagtcaatgattccatataatgaaaaacatttcaac
agagtagatcgtatcattcaaaaaacttatttattggattacaccatcgcatcaatcaac
ccaacacttaccagtaataatatctttaacaaaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (80)   
   KEGG ORTHOLOGY (1)   
   RefGene (76)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (92)   

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