KEGG   Desulfoscipio gibsoniae: Desgi_2996
Entry
Desgi_2996        CDS       T02657                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
dgi  Desulfoscipio gibsoniae
Pathway
dgi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Desgi_2996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dgi03021]
    Desgi_2996
   03400 DNA repair and recombination proteins [BR:dgi03400]
    Desgi_2996
Enzymes [BR:dgi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Desgi_2996
Transcription machinery [BR:dgi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Desgi_2996
DNA repair and recombination proteins [BR:dgi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Desgi_2996
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGL02381
UniProt: R4KS00
Position
complement(3053579..3053806)
AA seq 75 aa
MAMNRPSLDDLMDKVDSRYTLVVISAKRARQITEIALQQQDQQEESWVSGKPVSAALHEV
VRGNITYRRTKQGIK
NT seq 228 nt   +upstreamnt  +downstreamnt
atggccatgaatagaccttctctggatgatttaatggataaggtagacagccggtatacc
cttgtggtgatatcggccaagcgggcgcgtcaaataacggaaatagctctacaacaacag
gatcaacaagaagaatcctgggtctccggtaagcctgtttctgcggcgctgcatgaagtt
gtccggggaaatataacgtaccggagaaccaagcaggggataaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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