KEGG   Dokdonella koreensis: I596_2126
Entry
I596_2126         CDS       T04377                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
dko  Dokdonella koreensis
Pathway
dko03030  DNA replication
dko03430  Mismatch repair
dko03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I596_2126
   03430 Mismatch repair
    I596_2126
   03440 Homologous recombination
    I596_2126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dko03032]
    I596_2126
   03400 DNA repair and recombination proteins [BR:dko03400]
    I596_2126
Enzymes [BR:dko01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I596_2126
DNA replication proteins [BR:dko03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     I596_2126
DNA repair and recombination proteins [BR:dko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     I596_2126
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1 AMP_N
Other DBs
NCBI-ProteinID: ANB18145
UniProt: A0A160DUK1
Position
complement(2437894..2438598)
AA seq 234 aa
MRQIVLDTETTGLEVNKGHRLIEIGCIELAERRPTGRSFHRYLNPDRAIDEGAKAVTGIE
DEFLLDKPRFHEIAGEFIAFVDGAEVIAHNASFDVGFINAELALAGIGGTIQQRVQVIDT
LQLAREMWPGQRNGLDALCKRLGVDNSHRELHGALLDAQLLADVYLAMTAGQGDLGFASE
ASPAGVARRERTLVVIPLRVQRADPDEAASHAARLAAIEKAGKAPSLWTQLGWD
NT seq 705 nt   +upstreamnt  +downstreamnt
atgagacagatcgtcctggataccgagaccaccggtctggaggtcaacaagggccaccgg
ctgatcgagatcggctgcatcgagctggccgagcgccggccgaccggtcgcagcttccac
cgctacctgaatccggatcgcgcgatcgacgagggcgccaaggcggtgaccggcatcgag
gacgagttcctgctcgacaagccgcgcttccatgaaatcgccggggagttcatcgcgttc
gtcgacggcgccgaggtgatcgcccacaacgccagcttcgacgtcggcttcatcaacgcc
gagctggcactggccggcatcggcggaacgatccagcagcgcgtgcaggtgatcgacacg
ctgcagctggcgcgcgagatgtggcccggccagcgcaacggcctggatgcgctctgcaag
cggttgggcgtcgacaacagccaccgcgagctgcacggcgccttgctcgacgcgcagctg
ctggccgacgtctacctggcgatgacggcggggcagggcgatctcggcttcgcgagcgag
gcatcgcctgccggtgtcgcgcggcgcgagcgcaccctggtcgtgattccgctgcgcgtg
cagcgtgccgatccggacgaggccgccagccacgcggcgcggctggcggcgatcgagaag
gccggtaaggcgccgagcctgtggacgcagctcggctgggattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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