KEGG   Desulfofundulus kuznetsovii: Desku_0987
Entry
Desku_0987        CDS       T01499                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
dku  Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:dku00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dku03032]
    Desku_0987
   03400 DNA repair and recombination proteins [BR:dku03400]
    Desku_0987
Enzymes [BR:dku01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Desku_0987
DNA replication proteins [BR:dku03032]
 Prokaryotic type
  DNA Topoisomerases
   Desku_0987
DNA repair and recombination proteins [BR:dku03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Desku_0987
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Zn_ribbon_recom zf-GRF Toprim_4 zf-FPG_IleRS Lar_restr_allev
Other DBs
NCBI-ProteinID: AEG14582
Position
1015674..1017917
AA seq 747 aa
MSKTLVIVESPAKAKSIGKLLGKKYTIKASMGHVRDLPKSQFGVDVEHGFTPKYITIRGK
GEIIKELRTAVKKADRVLLASDPDREGEAIAWHLANVLEIDENAPCRIEFNEITKQAVQN
AVKAPRPIDYNRVNAQQARRILDRLVGYKLSPLLWRKVKKGLSAGRVQSVAVRLICDREE
EINAFVPEEYWTLTAVFTRRGKDPFEAKLYKIGDKKAEIKNQAQIEEILKELKGVSYRVV
KITRREKTRQPAPPFTTSSLQQEAYRKLNFTARKTMMVAQQLYEGLELGKEGPVGLVTYI
RTDSTRVAVQAQMDARAYIQEKFGPGYVPEKPRQVAARGRAQDAHEAIRPTAVEREPEAI
KQYLTPDQYKLYKLIWSRFVASQMSPAIIETTSIDITGGHYTFRAAGSVVKFPGFTRVYV
ESRDDETKEEEGVLPALSEGEALEVKSLTPKQHFTQPPPRYTDATLVKALEEKGIGRPST
YAPILETIIKRGYVVREKKQLVPTELGMVVVDLLKKHFPDIIDVEFTAQMEESLDRIEEG
EMDWVRVIQDFYGPFQETLARAEEEIGQVTVSDEVSEEICEQCGRNMVVKMGRYGKFLAC
PGFPECRNTRPLLEPTGVPCPQCKGELVVRRSKKGRKFYGCSRYPDCDFVVWDEPSGEKC
PRCGGILVIKKGRGEQEELECVNEQCRYRVDREKKAGSNGEAARDVAAGSKLVEEKPSFD
SWHNDALLPLMRAKSGRTATRGTGGRS
NT seq 2244 nt   +upstreamnt  +downstreamnt
ttgtccaaaacgctggttattgtggaatcgcctgccaaagcaaaaagcatcggcaagtta
ttgggtaaaaaatataccatcaaagcttctatggggcatgtgcgggacctgcccaaaagc
cagttcggggtggacgtggagcacggttttacacccaagtacatcaccataaggggcaag
ggagaaatcatcaaagagcttagaaccgcggtcaaaaaggccgaccgggtgttgctggct
tccgaccccgatcgggaaggggaggccattgcctggcatctggccaacgtactggaaatt
gacgagaatgcgccttgtcgcattgagtttaatgaaattacgaagcaggccgtgcaaaat
gccgtgaaggcaccccggcccattgactacaaccgggtaaatgcccagcaggcccgccgg
atactcgacaggctggtaggttataaactgagccccctgttgtggcgcaaggtcaaaaaa
ggtctttcagccggccgggtacagtcggtggcggtgcggttgatctgcgaccgggaagag
gagattaacgcctttgtccccgaagaatactggaccttgacggccgtatttacccgccgg
ggaaaggatccttttgaggccaaactgtacaagattggggataaaaaggcagaaataaaa
aaccaggcgcaaatcgaggagatcttaaaggagctgaagggggtctcctaccgggtcgtt
aaaattacccgcagggaaaaaacccgccagccggccccgccctttaccaccagcagcctg
cagcaggaggcttaccgcaagctcaatttcacggcccgcaaaaccatgatggtggcccaa
caattgtacgaggggctggaactgggtaaggagggccccgtaggtctggttacctatata
cgtaccgactccacccgggtggccgtgcaggcccaaatggacgcccgggcttacattcag
gaaaaattcggccccgggtatgttccggaaaaaccccggcaggtggcggccaggggaagg
gcgcaggatgcccacgaagccatccggcccaccgcggtggaacgggaacccgaggccatt
aagcagtaccttacgccggatcagtacaagctctataaattaatctggtctcgttttgtg
gccagccagatgagcccggccattattgaaaccaccagcattgatattaccgggggccac
tatactttcagagctgccgggtcagtggtcaaattccccgggtttacccgggtttatgtg
gaatcccgggatgacgaaactaaagaggaggaaggggttctgcccgccctttccgagggg
gaggccctggaggtcaaatcccttacgccgaaacagcatttcacccagccgcccccccgc
tataccgatgccaccctggtaaaggcgctagaggaaaaagggatcggccgccccagtacc
tatgcccccattctggaaacaattatcaagcggggatatgtggtgcgggagaaaaaacag
cttgttcccaccgagctggggatggtagtggtagatctattgaaaaagcattttcccgat
attattgatgtggagtttaccgctcaaatggaggaaagcctggaccgcatagaggaaggg
gaaatggattgggtgcgggtgatccaggacttttacggtcccttccaggaaactcttgcc
cgggcggaagaagaaatcggtcaggtgaccgtgtccgatgaagtcagcgaggaaatctgc
gaacagtgcggccgcaatatggtggtcaaaatgggtcgctacgggaagtttctggcctgt
ccgggctttcccgagtgccggaacacccggcccctgctggagcctaccggggtgccctgc
ccccagtgtaagggggaactggtggtgcggcgcagtaaaaagggccgcaagttttacggt
tgcagccgctaccccgattgcgattttgtggtttgggatgagccgtccggcgaaaaatgc
ccccgctgcggcggcatcctggtaattaaaaaggggcggggtgaacaggaggaattggaa
tgtgtcaatgagcagtgccggtaccgggttgacagggaaaaaaaggccggttccaacggt
gaggccgcccgggatgtggccgccgggagtaaactggtggaagaaaagccttcatttgac
tcctggcacaacgatgctttgctgcccttgatgagggcaaaatcaggccgcactgcaact
cgcggaactggaggaagaagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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