KEGG   Desulfofundulus kuznetsovii: Desku_1065
Entry
Desku_1065        CDS       T01499                                 
Name
(GenBank) Xylose isomerase domain-containing protein TIM barrel
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
dku  Desulfofundulus kuznetsovii
Pathway
dku03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dku00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Desku_1065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dku03400]
    Desku_1065
Enzymes [BR:dku01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Desku_1065
DNA repair and recombination proteins [BR:dku03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Desku_1065
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AEG14652
Position
1081538..1082428
AA seq 296 aa
MARGRGIVMGIRFGPAGNPPSFQAQGYKSSLDMPAWLRGQGLNAYEYQCVRGVHIGEATA
RKLGKVARENGVFLSIHAPYYITLGTTDPVFREKTKMHLLKSMQAAQWMGASPVVFHPGT
GGGKDRTGAMARARELLLEILAVAEEMGLGDIRVAPETAGKPAQLGNLDEVLEFCTLDPR
VVPAVDFAHLHAAGQGALKTVEDFATVLDRVESLLGKEAVQKLHIHFSPIEFTKAGEKRH
RTTLDDGFGPDFSLLARLIVERNLTPTIICESYDRQVEDALVFKALYEQIKEKAGG
NT seq 891 nt   +upstreamnt  +downstreamnt
ttggcaaggggaaggggtattgtgatgggcatacgtttcgggccggcaggaaacccgcca
tcctttcaggcccaggggtataaaagttccctggacatgcccgcctggttaagggggcag
ggtcttaatgcctatgaatatcagtgtgttcggggagtgcatatcggagaagctacggcc
aggaaacttgggaaagtggcccgggaaaacggggtattcttaagcattcatgccccctat
tacatcaccttagggactaccgatcctgttttcagggaaaaaacaaagatgcacttgctg
aaatctatgcaggccgcccagtggatgggggcttccccggtggtctttcacccgggaacg
ggaggtggaaaggacagaaccggcgctatggccagggccagggagctcttgctggagatt
ctagcggtagcggaggaaatgggattgggggatatccgtgtggcgccggaaacggcgggc
aaaccggcacaactgggtaatctggacgaggtgctggagttttgtaccctggacccccgg
gtggtgccggccgtggactttgcccatttacatgcggccggtcagggggcattgaaaacg
gtagaggattttgcaaccgttttagatcgggttgaaagccttttgggcaaagaggcggtt
cagaaactgcatattcatttcagccccattgaattcaccaaagccggggaaaaaagacac
cgcaccacattggatgatggttttggtcccgatttcagccttttggcccggctgatcgtg
gaaagaaacctcacccccaccattatctgcgaatcctatgatcgccaggtggaagacgcc
ctcgtctttaaagcactttacgagcaaataaaagaaaaggcagggggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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