KEGG   Desulfofundulus kuznetsovii: Desku_3546
Entry
Desku_3546        CDS       T01499                                 
Name
(GenBank) Sigma 54 interacting domain protein
  KO
K01338  ATP-dependent Lon protease [EC:3.4.21.53]
Organism
dku  Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:dku00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dku01002]
    Desku_3546
Enzymes [BR:dku01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.53  endopeptidase La
     Desku_3546
Peptidases and inhibitors [BR:dku01002]
 Serine peptidases
  Family S16: lon protease family
   Desku_3546
SSDB
Motif
Pfam: Lon_C Sigma54_activat AAA Mg_chelatase ChlI RuvB_N AAA_5 AAA_16 AAA_22 AAA_19 AAA_18 AAA_30 AAA_25 NTPase_1 Sigma54_activ_2 NB-ARC AAA_14 AAA_2 nSTAND3 AAA_24 MCM Nexin_C DNA_pol3_delta2 ATPase_2 IstB_IS21 NACHT RNA_helicase Ribosomal_S9 Exo84_C AAA_17
Other DBs
NCBI-ProteinID: AEG17022
Position
complement(3580758..3582671)
AA seq 637 aa
MKVFLHKFKGSREEPGTRLKGVEQLRRQVNALYGLVANIYGSDKLVLRAGKLNVLHLMRS
EHLEDRVLALQKLVFEDPTLDAVPDIEEVPAILEQIEEEIADILARRTVEDELEKKVSEK
LQQRHEEYVKEIKMQVLKENTGPENAQTLKKLAVLEKLEQKKLARSAMEVLRPGNFSELV
GQERAVKALLAKLASPFPQHIILYGPPGVGKTTAARLALEAAKNITGSPFAKDAPFVEVN
GTALRWDPREVTNPLLGSVHDPIYQGARRDLADSGVPEPKLGLVTEAHGGVLFIDEIGEM
DPVLQTKLLKVLEDKRVFFDSPYYDPHDPAVPRYVRKLFEEGAPADFILIGATTREPEEI
NPAIRSRCAEVYFEPLTPQDIERIIRQAAEKLGVRMDEQVPGVISQYTIEGRKAIGILAD
AYGLACYRGGGEVGEEGITLQDVHEVIQASRLSPYVLRKASPEMEVGKVFGLGVVGFVGS
VLEIEAVAFPARNQGQGTIRFNDTAGSMARDSVFNAASVMRKITGEDLASYDVHINVIGG
GRIDGPSAGAAIFLAILSAIQERPIPQDVAITGELSIQGRIRGVGGIVEKIYGARQAGMR
RVIIPAENTSDVPAGLQGVEVIPVATVEEMLQHIFTR
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgaaagtttttttgcacaaattcaaaggcagcagggaagaacccggtaccaggctcaag
ggagtggaacaacttcgccgccaggtaaacgccctctatggcctggtggccaacatctat
ggttcggataaactggttttgcgggccgggaaactgaatgttctgcatttaatgcgctct
gagcacctggaagacagggttctggcccttcagaagctggtgtttgaagatcccaccctg
gatgccgtgcccgacattgaggaggttccggccattttggagcagatcgaagaggagatt
gccgatatcctggcccggcgcacggtggaagatgaactggagaaaaaagtcagtgaaaag
ttgcagcaacggcacgaagagtatgtaaaagaaattaaaatgcaggtgctcaaggaaaat
accggcccggaaaatgcccagaccttgaagaaactggctgttctggaaaagctggagcaa
aagaaactggcccgctcggccatggaagtgctccgcccggggaatttttcagaactggtg
ggccaggaaagagccgtgaaggcgctgctggccaaactggcctccccctttccccagcac
atcattttgtacgggccgcccggggtgggtaaaactaccgctgcccggctggctctggaa
gcggccaagaacatcaccggctccccttttgccaaggatgctccttttgtggaggtaaac
ggcaccgccctgcggtgggatccccgggaggtaaccaaccctcttttaggttcggtccac
gaccccatttaccagggggcgcggcgggatttagccgacagcggcgtgcccgagcccaag
ctgggcctggttactgaggcccacgggggtgtccttttcattgatgaaattggcgaaatg
gaccccgtgctgcagaccaagctgctgaaggtgctggaggataaaagggtcttttttgac
tccccctattacgatccccatgatcccgcggttccccgctatgtgcgcaagctatttgaa
gaaggggcgccggctgatttcattttaatcggggccaccacccgggaaccggaggaaatt
aacccggccatccgctcccgctgtgcggaggtttattttgaacccctgacgccgcaggac
atcgagcgcatcatcaggcaggcggcggaaaaactgggggtgcggatggacgagcaggtt
cccggggtgattagccagtacaccattgaggggcgaaaggccatcggtatcctggccgac
gcctacggcctggcctgctaccggggcgggggagaagtgggggaagaaggcattaccttg
caggatgtccatgaggtaattcaggccagccgcctgagcccatacgtcctgcgcaaggcc
tctccggagatggaggtaggcaaggttttcggcctgggggtagtgggctttgtgggctcc
gtactggaaattgaagcagtggccttcccggcccgcaaccagggtcagggtaccatccgt
tttaacgatacggcgggcagcatggcccgggactccgttttcaacgccgcttcagtgatg
cgcaaaattaccggcgaggacctggccagctacgacgtgcacattaacgtgatcggggga
gggcgcattgacggcccctcggccggggcggccatcttcctggccattttaagtgccatc
caggaaaggcccattccccaggacgtggccattaccggggagctatccattcaggggcgc
atcaggggcgtgggcggcatcgtggaaaaaatttacggtgcccgccaggcgggcatgcgc
cgggtgatcatccccgcggaaaacacaagcgacgtcccggccggcctgcagggggtagaa
gtcattcccgtggccacggtggaggaaatgctgcagcatattttcaccagatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (30)   
   Pfam (30)   
All databases (38)   

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