KEGG   Dehalogenimonas lykanthroporepellens: Dehly_1123
Entry
Dehly_1123        CDS       T01264                                 
Name
(GenBank) Xylose isomerase domain protein TIM barrel
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
dly  Dehalogenimonas lykanthroporepellens
Pathway
dly03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Dehly_1123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dly03400]
    Dehly_1123
Enzymes [BR:dly01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Dehly_1123
DNA repair and recombination proteins [BR:dly03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Dehly_1123
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: ADJ26421
Position
complement(1104096..1104941)
AA seq 281 aa
MLIFGTAGIPLSTPPSGDTIAGLRQVSQLGLGSMEIEFVRSIYLRDNTAPPVACVGGKLG
LRLSCHAPYYLNLNASDEEKLRKSAVMIRQSARIASLAGARTLVFHPGYYLKEAPETVYF
RIKHQLEMIVDKLNDEGVSIELRPELAGKTSQFGTLSEILRLSKEIPGVAPAIDFAHLYA
ATGRYNSYPEFAQVLEKIGEVLGPDALKNLHLHVSGIESGNGGERRHRNLLETSYRYEEL
IQALIDFQASGLVICESPNIEDDALLLQSTWRELSPGPLKA
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcttatattcggaaccgccggcattccgctcagcacccctccatccggtgataccata
gccggcctcagacaggtgagccagctgggtttggggtcgatggaaatagaattcgtgcgt
agcatttacctgcgggataatactgccccgccggtggcctgtgtcggcggtaagctgggg
ttgcgtctgtcctgtcacgcgccatattatcttaatctgaacgcatcagacgaggagaaa
cttcgcaagtcagcggtgatgattcgtcaatcggctcgcatcgcctctttagccggagct
cgaaccctggtttttcatcccggttactatctcaaggaggcgccggaaaccgtttatttc
aggataaaacatcagctggaaatgatcgtcgacaaactgaatgatgagggcgtgtctatt
gaattaaggccggaactggccggtaaaacgtcacaattcgggacgctgtcggaaatattg
cggttgtcgaaggagataccgggagtggctccggccattgacttcgctcatctgtatgcc
gcgacgggccggtataacagttaccctgaatttgcccaggtactggaaaaaatcggtgag
gttttagggccggatgcgctcaagaacctccatcttcatgtttccggtatagaatccggc
aatggcggagagcggcgtcaccggaatctgcttgaaaccagctaccgatatgaagaattg
atccaggcactgatagattttcaagcctccggtctggttatctgtgagagtcccaatata
gaggatgacgccttgttactgcaaagtacctggagagaactttcgcctggaccactcaag
gcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system