KEGG   Solidesulfovibrio magneticus: DMR_05580
Entry
DMR_05580         CDS       T00917                                 
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
dma  Solidesulfovibrio magneticus
Brite
KEGG Orthology (KO) [BR:dma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dma03400]
    DMR_05580 (phr)
Enzymes [BR:dma01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     DMR_05580 (phr)
DNA repair and recombination proteins [BR:dma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    DMR_05580 (phr)
 Prokaryotic type
    DMR_05580 (phr)
SSDB
Motif
Pfam: DNA_photolyase
Other DBs
NCBI-ProteinID: BAH74049
NITE: DMR_05580
UniProt: C4XI87
Position
complement(626299..627648)
AA seq 449 aa
MLVHPARVRPLAEKPRRAGPVVYWMSRDQRAEDNWALLAAADLARETGAPLHVAFALAPG
YPGASLRHYDFMLRGLAETEAALRARGVPFHLLLGDPAAVAPEFLRAIAAGACVTDFDPM
RVKTLWKRAVAEAFAGPLLEVDAHNVVPCVVASPRREYAAATFRPKIHKRLQEFLEPFPE
LPAFPDVALVATPPVDWGAARASLSVDAFPGPVPDIVPGPAAARAALDAFTAERLPGYAA
RRNDPNAGAVSGLSPYFHFGQLAPQRAALEVLAARAGHVADADAYLEELLVRRELSDNYC
HYTPNYDRYDALPDWARKTLDAHAGDEREHRYTPAQFEAAASHEALWNAAQRELVATGRI
HGYMRMYWAKKILEWSPSPRQALDTALSLNDRYALDGRDPNGVVGVLWSVGGLHDRPWAT
RPVYGQIRYMNERGCRRKFDANAYIARHS
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgctggtccatcccgcccgcgtccgaccacttgccgaaaaaccccgccgcgccgggccg
gtcgtctattggatgagccgcgaccagcgggccgaagacaactgggccctgctcgccgcc
gccgatctggcccgggaaaccggcgcgccgctccatgtcgcctttgccctggccccggga
tacccgggggccagccttcgccactacgacttcatgctgcgcggcctggccgaaaccgag
gccgcgctccgggcgcgcggcgtgccctttcatctgctcctgggcgatccggccgccgtg
gcgccggagttcctgcgagcgattgcagccggagcctgcgtcaccgatttcgaccccatg
cgcgtcaagaccctatggaaacgcgccgtggccgaggctttcgccggcccactcctcgaa
gtcgacgcccacaacgtcgtgccctgcgtcgtggcctcgccgcgccgggaatacgccgcc
gccacctttcgcccgaaaatccacaagcggctccaggaattcctggaacccttccccgag
ctgccggcctttcccgacgtcgccctggtcgccacgccgcccgtggactggggcgcggcc
cgggccagcctctccgtggacgccttccccggcccggtcccggacatcgtccccggcccg
gctgcggcccgggccgccctggacgcgtttacggccgagcgcctgcccggctacgccgcg
cgccgcaacgaccccaacgccggggccgtctcgggcctgtcgccctatttccacttcggc
cagcttgccccccagcgcgccgccctggaggtgctggccgcccgggcaggccacgttgcc
gacgcggacgcctatctcgaagaactcctcgtgcgccgcgagctgtccgacaattactgc
cattatacgccaaactacgaccgctacgacgccctgcccgactgggcgcgcaaaaccctg
gacgcccatgccggcgacgaacgggagcaccgctacacgccggcccagttcgaggccgcc
gccagccatgaagccctgtggaacgccgcccagcgcgagctggtcgccacgggccgcatc
cacggctacatgcgcatgtactgggccaagaaaatcctggaatggtcgccctcgccgcgc
caggccctggacacggccctgtccctcaacgaccgctatgccctggacgggcgcgaccca
aacggcgtggtcggggtgttgtggtccgtgggcggcctccacgaccggccctgggccacg
cggccggtttacggccagatccgctacatgaacgaacggggctgtcgccgcaaattcgac
gctaacgcctacatcgcccgccattcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system