KEGG   Dehalococcoides mccartyi DCMB5: dcmb_1054
Entry
dcmb_1054         CDS       T02476                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
dmd  Dehalococcoides mccartyi DCMB5
Pathway
dmd00740  Riboflavin metabolism
dmd01100  Metabolic pathways
dmd01110  Biosynthesis of secondary metabolites
dmd01240  Biosynthesis of cofactors
dmd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dmd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    dcmb_1054 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    dcmb_1054 (ribD)
Enzymes [BR:dmd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     dcmb_1054 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     dcmb_1054 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AGG06654
UniProt: A0AA85ZX61
Position
complement(1005812..1006909)
AA seq 365 aa
MKYMSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEKA
KGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSGKGKKELEDAGIKVH
LGMMEREARQMNEAYFKHVTTGMPFVTAKYAMSLDGKTGTRTGDSKWISNEESRHFAHYI
RHISDVIMAGLNTILKDDPHLTARVNCGRGGTSHSQPTRVIIDDNGRAPLSSNVFHVPGN
TIVAVAKGLTPEEKQAYDEVGAKVVELPDERGLVDLKALLRYLGQNGVTSVLVEGGGIVL
GSLFDLKLVDKVLVFVAPIIIGGKDAKIPVAGVGAELITDSAKFKDITTTIFGQDVLISG
YVIKE
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaaatatatgtctcaggctttgtcgcttgccaaactggccataggtcaggttagccct
aacccgtcggtaggggctgttattgttaaaaacggcgaagtagtcgggcagggttttacc
cagccgcccggcggtgaccatgctgagatagtggccttgaaacaggctgccgaaaaagcc
aaaggggctactttatacgtaactttagagccgtgctgtcatcaggggcgaaccccgccc
tgcaccggttctgtcatagcatcaggcatcaaagaagtttatattgctacgctggatgat
aatcctctggtttccggcaaaggcaaaaaagagctggaagatgccggtataaaggttcat
ctgggtatgatggagcgtgaagcccgccagatgaacgaagcttatttcaagcatgttacc
accggaatgcccttcgtaaccgccaaatatgccatgagccttgacggtaaaacgggtacc
cgtaccggtgattccaaatggatttccaacgaagaatcccgccattttgcccattatatc
cgccatatatcagatgtcattatggccggacttaataccatacttaaagatgatccccac
ctgactgccagagttaactgcggacggggcggtacatcacacagtcagcccaccagggta
attattgacgataatggccgagcgccgttaagttctaatgtttttcatgttcccggtaat
actattgtggctgttgccaaaggtcttacccctgaagaaaaacaggcgtatgatgaggtt
ggggctaaagtggtggagctgccggatgaacggggactggtagacctcaaagccctgctt
cgttatctggggcaaaacggggtaaccagtgtgctggtggaaggcggcggcattgtactc
ggttcgctttttgacctgaaactggtggataaagtgctggtatttgtagctcctatcatt
ataggcggcaaagacgccaagattccggttgccggtgtcggggcagaacttattacagat
tcagccaagttcaaggatattaccactaccatattcgggcaggacgtgttgatttccggt
tacgttattaaggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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