KEGG   Drosophila melanogaster (fruit fly): Dmel_CG15481
Entry
Dmel_CG15481      CDS       T00030                                 
Symbol
Ski6
Name
(RefSeq) Ski6, isoform B
  KO
K11600  exosome complex component RRP41
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dmel_CG15481 (Ski6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG15481 (Ski6)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Dmel_CG15481 (Ski6)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     Dmel_CG15481 (Ski6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 34721
NCBI-ProteinID: NP_001260437
FlyBase: FBgn0032487
UniProt: Q9VK19
Position
2L
AA seq 246 aa
MSGKYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK
GNQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIY
VEVLQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFEEVSGGP
KLTVAALPTAEKIAFLEMSERFHIDHLETVIETAMAGCREIRDILEAAVKEHLLHMGSAS
DFAKVG
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtctggtaaatacgatctgctcagtgagcagggcctccgtctggacggacgacgtcct
catgaattgcgccgcatcaagtgcaaactgggagtcttcgagcagcccgatggaagtgcc
tacatggagcagggaaacaccaaggttctggctgccgtctatggaccccaccaggccaag
ggcaatcagacagagtccgtcatcaactgtcagtacagtcaggcaaccttctccacggcg
gagcgcaaaaataggccgcgcggcgatcgcaaatctctggagttcaagttgtacctgcag
caggcgctaagtgctgccattaaatcagaactatatccccgctcccagatagacatatac
gtggaggtgctccaagacgacggcgccaactatgcggtggctcttaatgccgccacactg
gcgctaattgatgcgggaatctgcctcaatgagttcattgtcgcctgcaccgcctcactg
agcaaatcgaacatcccgctcacagacatctctcagttcgaggaggtatccggcggaccg
aaactaaccgtggctgccttgcctaccgccgagaaaatcgcctttcttgagatgagtgag
cggttccacatcgatcacttggaaaccgtcatcgagactgctatggcgggttgccgcgaa
ataagggacattctggaggcagcagtcaaggagcaccttctgcacatgggcagtgcctct
gactttgcgaaagttggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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