KEGG   Drosophila melanogaster (fruit fly): Dmel_CG17170
Entry
Dmel_CG17170      CDS       T00030                                 
Symbol
su(f)
Name
(RefSeq) suppressor of forked, isoform F
  KO
K14408  cleavage stimulation factor subunit 3
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Dmel_CG17170 (su(f))
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG17170 (su(f))
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     Dmel_CG17170 (su(f))
SSDB
Motif
Pfam: Suf
Other DBs
NCBI-GeneID: 3354994
NCBI-ProteinID: NP_001015241
FlyBase: FBgn0003559
UniProt: P25991
Position
X:23096771..23101431
AA seq 765 aa
MSSARDLIKVDIEWGMERLVRAQQVVELRPYDIESWSVMIREAQTRPIHEVRSLYESLVN
VFPTTARYWKLYIEMEMRSRYYERVEKLFQRCLVKILNIDLWKLYLTYVKETKSGLSTHK
EKMAQAYDFALEKIGMDLHSFSIWQDYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTP
IVGIEQLWKDYIAFEQNINPIISEKMSLERSKDYMNARRVAKELEYHTKGLNRNLPAVPP
TLTKEEVKQVELWKRFITYEKSNPLRTEDTALVTRRVMFATEQCLLVLTHHPAVWHQASQ
FLDTSARVLTEKGVRTSVENISPILCVPVVNQIEWVMAFAWWWAKDVQAAKIFADECANI
LERSINGVLNRNALLYFAYADFEEGRLKYEKVHTMYNKLLQLPDIDPTLVYVQYMKFARR
AEGIKSARSIFKKAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPEYV
MCYIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLSSIVKVERR
RSAVFENLKEYEGKETAQLVDRYKFLDLYPCTSTELKSIGYAENVGIILNKVGGGAQSQN
TGEVETDSEATPPLPRPDFSQMIPFKPRPCAHPGAHPLAGGVFPQPPALAALCATLPPPN
SFRGPFVSVELLFDIFMRLNLPDSAPQPNGDNELSPKIFDLAKSVHWIVDTSTYTGVQHS
VTAVPPRRRRLLPGGDDSDDELQTAVPPSHDIYRLRQLKRFAKSN
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgtcttcggccagagaccttatcaaagtcgacatagaatggggcatggagcgcctggtg
cgagctcagcaagtggtggagctgcggccctatgacatcgagtcctggagtgtcatgatc
cgagaggcccaaacgcggccaatccacgaagtacgcagtctttacgagtcgctagttaat
gtgtttccgacaaccgctcggtactggaagctatacattgagatggagatgcgcagccgg
tactatgaacgcgtggagaaactttttcaacgctgcctagtcaagattttgaacatcgac
ctctggaagctctatcttacctacgtgaaggaaaccaagtcgggtctaagtactcacaaa
gaaaaaatggcccaggcttatgattttgcactggagaaaatcggcatggatctacactcg
ttcagcatctggcaggattacatatactttctgcggggcgttgaagcagtgggcaactat
gcagagaaccaaaagatcacagcagtgcgccgcgtctatcaaaaggctgtagtcacacct
atcgtgggcatcgagcagttgtggaaggactatatcgcattcgagcaaaacataaacccg
attatatcagagaagatgagtctggagcgatctaaggattacatgaacgctcgtcgtgtt
gccaaagagttggaataccacacaaagggtctcaatcgcaatctgccagccgtcccaccc
acactcacaaaagaggaggtgaagcaagtggagctgtggaagcgctttatcacgtatgag
aagtctaatcccttgcgcactgaagatacggccctagtaacccgtcgtgtcatgttcgcc
acggagcaatgtttgctggtgctcacccaccacccggcagtgtggcaccaggcctcccaa
ttcctggacaccagtgctcgcgtgctcaccgaaaaaggcgtgcgtactagtgttgaaaac
atttcacctattctctgcgttcctgtagtgaatcaaatagagtgggttatggcctttgct
tggtggtgggcaaaggacgtccaggcggccaagatttttgcggacgagtgtgctaatata
ctggaacggtctataaacggcgtgctaaaccgaaatgcgttgctatattttgcctatgcg
gactttgaagaaggacggctcaagtacgagaaggtgcacactatgtacaacaagctgtta
cagttgccagacattgatcccacattggtctatgttcagtacatgaagttcgcccgtcgt
gctgaggggatcaagtcggcccgtagcatatttaagaaagctcgggaggacgtaaggtcg
cgctatcacattttcgtggccgctgctttaatggagtattattgctccaaggacaaagaa
attgcgttccgcatcttcgagctgggattgaagcgttttggtggcagtccagagtacgtg
atgtgctacattgactacctgtcccatctaaacgaggacaataatacgcgcgtcctgttt
gaacgggtacttagttcaggtggtttgtcgccgcacaagagtgttgaggtctggaatcgc
ttcctcgagttcgaatctaatattggggatctctccagcatcgttaaggtcgaacgtcgc
cgtagtgccgttttcgaaaaccttaaagagtatgagggcaaggagaccgcccagctggtt
gaccgttacaaatttctggacctttacccctgcaccagcaccgagctcaagtccatagga
tatgctgagaatgtgggcattatactgaacaaggtgggtggtggagctcaaagccagaac
accggagaggtcgaaacagatagcgaggcaacgccaccattgccacgtccggatttctcc
cagatgattccattcaagccgcgtccatgtgctcatcctggtgcccatccacttgcaggt
ggtgtatttccgcagccgccagctctggccgctttgtgcgccaccctgcctccaccgaac
tccttccgtggaccgttcgtcagcgtagagctactattcgacattttcatgcgtctcaat
cttccggactctgcaccgcaaccgaatggagacaacgaattgtcgcctaagatcttcgat
ctggccaagtcggttcactggatcgtggatacaagtacgtatacgggggtgcagcacagt
gttacggccgttccaccgcgccggcgacgactgctgcctgggggcgatgatagtgacgac
gaactgcagaccgctgtgccgccctcccacgatatatatcgcctgcgtcagctaaagcgt
ttcgccaagtctaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (46)   

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