KEGG   Drosophila melanogaster (fruit fly): Dmel_CG2125
Entry
Dmel_CG2125       CDS       T00030                                 
Symbol
ci
Name
(RefSeq) cubitus interruptus, isoform A
  KO
K16799  transcriptional activator cubitus interruptus
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme04341  Hedgehog signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:dme00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04341 Hedgehog signaling pathway - fly
    Dmel_CG2125 (ci)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dme03000]
    Dmel_CG2125 (ci)
Transcription factors [BR:dme03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 GLI-like
    Dmel_CG2125 (ci)
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 FOXP-CC Zap1_zf1 zf-C2H2_4
Other DBs
NCBI-GeneID: 43767
NCBI-ProteinID: NP_524617
FlyBase: FBgn0004859
UniProt: P19538 H5V858
Structure
Position
4:complement(47710..57041)
AA seq 1397 aa
MDAYALPTYFPLAYSELQFLASRRAAAVAAAATVLPGSPCINQHHPTDVSSSVTVPSIIP
TGGTSDSIKTSIQPQICNENTLLGNAGHQHNHQPQHVHNINVTGQPHDFHPAYRIPGYME
QLYSLQRTNSASSFHDPYVNCASAFHLAGLGLGSADFLGSRGLSSLGELHNAAVAAAAAG
SLASTDFHFSVDGNRRLGSPRPPGGSIRASISRKRALSSSPYSDSFDINSMIRFSPNSLA
TIMNGSRGSSAASGSYGHISATALNPMSHVHSTRLQQIQAHLLRASAGLLNPMTPQQVAA
SGFSIGHMPTSASLRVNDVHPNLSDSHIQITTSPTVTKDVSQVPAAAFSLKNLDDAREKK
GPFKDVVPEQPSSTSGGVAQVEADSASSQLSDRCYNNVVNNITGIPGDVKVNSRLDEYIN
CGSISIPSNEYDCANADTTDIKDEPGDFIETNCHWRSCRIEFITQDELVKHINNDHIQTN
KKAFVCRWEDCTRGEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRS
HTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYICKAPGCTKRYTDPSSLRKHVK
TVHGAEFYANKKHKGLPLNDANSRLQQNNSRHNLQEHNIDSSPCSEDSHLGKMLGTSSPS
IKSESDISSSNHHLVNGVRASDSLLTYSPDDLAENLNLDDGWNCDDDVDVADLPIVLRAM
VNIGNGNASASTIGGSVLARQRFRGRLQTKGINSSTIMLCNIPESNRTFGISELNQRITE
LKMEPGTDAEIKIPKLPNTTIGGYTEDPLQNQTSFRNTVSNKQGTVSGSIQGQFRRDSQN
STASTYYGSMQSRRSSQSSQVSSIPTMRPNPSCNSTASFYDPISPGCSRRSSQMSNGANC
NSFTSTSGLPVLNKESNKSLNACINKPNIGVQGVGIYNSSLPPPPSSHLIATNLKRLQRK
DSEYHNFTSGRFSVPSYMHSLHIKNNKPVGENEFDKAIASNARRQTDPVPNINLDPLTNI
SRFSTTPHSFDINVGKTNNIASSINKDNLRKDLFTVSIKADMAMTSDQHPNERINLDEVE
ELILPDEMLQYLNLVKDDTNHLEKEHQAVPVGSNVSETIASNHYREQSNIYYTNKQILTP
PSNVDIQPNTTKFTVQDKFAMTAVGGSFSQRELSTLAVPNEHGHAKCESFHHQSQKYMNT
DIGSKQQSALPSAHQRQTEKSNYNQIIDSSMTSLPELNVDSIYPRNETENIFKVHGDHDN
EIQCGIISQSQMSPSTNLNNDGQFSTVNMQPITTSKLFPPEPQKIVCDTQASNTSVMHLD
TYQRTLEYVQSCQNWMETNNTSTNQIQSLPGMPVNNTLFPDVSSSTHPYHGTNMVINDMT
TSLTSLLEENRYLQMMQ
NT seq 4194 nt   +upstreamnt  +downstreamnt
atggacgcctacgcgttacctacatattttcctcttgcgtattctgaattgcagttttta
gcgtccaggagagcagctgccgtcgctgcagcggctactgttttaccaggatcaccatgc
ataaaccaacatcacccaactgacgtttcaagctcggtaacagtgccatcaattattcca
acgggtggaacatcagattcaattaaaacttcaatacaaccacaaatatgcaatgaaaac
acccttcttggaaatgctggccaccagcacaatcatcagcctcaacatgttcacaatata
aatgttactggacagccacatgactttcacccggcctatagaattcccggatacatggaa
cagttgtattctcttcaacgaactaattcagcttcatcttttcacgatccctatgtcaat
tgtgcatcagcattccatcttgccggacttggtttgggatcagctgattttttgggcagc
cgaggtttgagctctttgggtgaactgcataatgctgctgtggcagcagcagcagccgga
tctctcgcaagtactgattttcacttcagtgttgatggaaacaggcggttgggtagccct
cgaccaccaggaggaagtatacgtgccagcataagccgcaaacgagcactttcgtcatcg
ccttattccgattcatttgatattaattcaatgattcgattttcgccaaactctttagcc
acaattatgaacggttctcgaggaagcagcgcggctagtggttcttacggtcatatttct
gctaccgcccttaatcccatgtctcatgttcattcaacccgtctgcaacagatacaagct
catttattgcgtgcaagtgcaggtctgttaaatccgatgacaccacaacaagttgctgca
tctggattttctatagggcatatgccaacctctgcttctttgagagtgaatgacgtacat
cctaatctaagcgattcacatatccagataacaacatccccaactgttacaaaggatgta
agccaggtcccagcggcagcattctcgttgaagaacttagatgatgcaagagagaaaaag
ggaccctttaaagatgttgtccccgagcagccttcatcgacatctggcggcgtagcacaa
gtagaagccgacagtgcgtcttcacagttgtctgaccgttgttacaacaacgtggtaaac
aatattacaggcattcctggtgacgttaaagtaaacagccgcttggatgagtatattaat
tgcggatcaatttcgattccgtcaaatgaatatgattgtgctaatgctgatactacggat
atcaaggatgaacccggagatttcattgaaacaaattgtcattggcgtagctgtcgcatt
gagttcattacgcaagatgaacttgttaaacatataaataatgatcatattcaaacaaac
aagaaagcttttgtctgtcgatgggaagattgtacacgcggtgaaaaaccatttaaagcg
cagtatatgcttgttgtgcatatgcggcgtcataccggtgaaaagccacacaaatgcacg
tttgaaggctgctttaaggcatattcacgtttggaaaacctgaaaactcatttacggtca
cacacaggagaaaaaccatacacttgcgagtatccgggatgtagcaaagcctttagtaat
gctagtgatcgcgcaaagcatcaaaatcgaacacacagtaatgagaaaccgtacatttgt
aaagcacctggatgcacaaaacgttacaccgacccgagctctttgagaaaacatgtaaaa
acagtccatggagctgaattttatgcaaataaaaaacataaggggttgcctctaaatgac
gcaaactctcggttacaacaaaacaacagtcggcataatcttcaagagcacaatatcgac
tcaagcccttgcagtgaagactcacatttgggaaaaatgttaggcacgtctagtcctagc
attaaatctgaatcagatataagctcatcaaaccatcacttagtaaatggagttcgagca
tctgacagtttgttaacatattcacctgatgatcttgctgaaaatcttaatttggatgat
ggctggaattgtgacgatgacgtggacgtggcagacctaccaattgtgttacgtgctatg
gtaaatattggtaacggaaatgcatccgcctcgactattggaggttctgttttggctagg
caacggtttagaggtcgtcttcaaactaaaggtataaattcaagtacgattatgctttgc
aacattccagaaagcaatcgtacctttggaattagcgaacttaatcagcgtattacagaa
ctgaaaatggagccaggtactgatgctgaaattaaaattcctaagctcccaaacacgacc
ataggaggatatacggaagaccctttacaaaaccaaacaagttttcgtaatacagtatcg
aataagcaaggaactgtttccggatcgatacaaggacagtttcgtcgcgatagtcaaaat
tccactgcaagcacttattacggtagcatgcaaagtcgtcgtagcagtcaatcatcccag
gtgtcttctatacctaccatgcgaccgaacccctcgtgtaactcgactgcatccttttat
gatcccatttcaccagggtgctcacggcgctctagccaaatgtcaaatggtgctaactgc
aattcatttacttccacatcaggactacccgtattaaataaggaatcgaacaaaagctta
aatgcatgtattaataaacctaatatcggggttcagggtgttggaatttacaatagcagt
ctacccccacctccatcgtcccacttaattgcaacaaacttaaagcgcttacagcggaaa
gattcagaatatcacaatttcactagcgggcgattttctgttcctagttatatgcattct
ttacacataaaaaacaacaaaccagtcggagaaaacgaatttgataaagcaatagcgagt
aatgcacgacgtcaaactgatccagtgccaaacataaacttagatccattaacaaatatt
tctcggttcagtacaacaccgcatagctttgatattaatgtcggaaagactaataatata
gcatcgtcaattaataaggacaatttaagaaaggatctgttcactgtttcaattaaggct
gacatggcaatgactagtgaccaacatccaaatgaaagaataaatttggacgaagttgaa
gaacttatacttcccgatgaaatgcttcagtacttaaacttggtaaaagacgacacaaat
catttggaaaaagaacatcaagctgtacctgtggggtcaaatgtatccgaaactatagct
tcaaaccactaccgagaacaatcaaatatatattacaccaataaacaaattttaacaccg
ccttctaacgttgatatacaaccaaatacaacaaagtttacagtacaagacaaatttgct
atgacggcggtcgggggttcattcagtcaaagagaattaagtaccctagctgtaccaaat
gaacatgggcatgccaaatgcgaaagcttccatcaccagtctcaaaaatatatgaacact
gacattggctccaagcagcaatcagcattaccgtcagctcatcaacggcaaacagaaaaa
tcaaattataatcaaatcatagactcatcgatgactagcttgccagaacttaatgtagat
tcaatatatccacgaaacgaaacagaaaatatatttaaagtacacggagatcatgataat
gaaatccaatgcggcattataagtcaatctcaaatgtcaccttccactaatttgaataat
gatggtcagttttctaccgtaaatatgcaaccaataacaacatccaaattatttccccct
gaaccacaaaaaatagtttgtgacacccaagcgagtaatacttcggttatgcatttagat
acatatcagcgtactctggaatatgtacaaagttgtcaaaactggatggagacgaacaac
acatctaccaatcaaatacaaagcctcccgggaatgccggtaaacaatacattgtttccc
gatgttagcagctctacacatccatatcatgggacaaatatggtgatcaacgatatgact
acatcccttacttccttactcgaggaaaatagataccttcaaatgatgcagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (68)   

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