KEGG   Drosophila melanogaster (fruit fly): Dmel_CG31716
Entry
Dmel_CG31716      CDS       T00030                                 
Symbol
Cnot4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4, isoform H
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dmel_CG31716 (Cnot4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dme03000]
    Dmel_CG31716 (Cnot4)
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG31716 (Cnot4)
   04121 Ubiquitin system [BR:dme04121]
    Dmel_CG31716 (Cnot4)
Enzymes [BR:dme01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     Dmel_CG31716 (Cnot4)
Transcription factors [BR:dme03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    Dmel_CG31716 (Cnot4)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dmel_CG31716 (Cnot4)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     Dmel_CG31716 (Cnot4)
Ubiquitin system [BR:dme04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    Dmel_CG31716 (Cnot4)
SSDB
Motif
Pfam: zf-RING_4 RRM_1 zf-C3HC4_3 zf-UDP Nup35_RRM zf-RING_2
Other DBs
NCBI-GeneID: 34416
NCBI-ProteinID: NP_001188776
FlyBase: FBgn0051716
UniProt: M9MRH8
Position
2L
AA seq 1059 aa
MNGLSSNDDAVECPLCMEPLEVDDLTFFPCTCGYQICRFCWHRIRTDENKLCPACRKEYP
ENPADFKPLSQEEMIAFKSQKRQRDQQRKQKITENRKHLANVRVVQKNLVFVVGLPPRLA
DADILKKHEYFGKYGKIHKVVINPSTTYAGVQGPSASAYVTYVNNSDALRAIQSVNNIMI
DGRLIKTSLGTTKYCSHFMKNQQCPKGDCMYLHELGDPEASFTKEEMHQGKHLEYEKRLH
DTLIASLGPNATGIVNGNGASKANVAIPSSSSASSSSSGSGTNGSSASGNAQQKEAWPSL
SVSPINGKEAAATATSSSGKSKREKLRNEKRHEKNKAKNKNGSNTNANASNKENYVPETR
SSTSTETFAEATADAPASTKAEPPQASSNRTRADRGKDRTTASAKEQKKSKEAAPAPAAS
KPAERVETSESTIRQKKAEVTESCEDNLPQKRLAGTNVQRSVSSCSENSEGHVSESSLSE
KSLTGDYVEEKCNSVNSESQQESVKFQEELEKSNEAIVEAETILPTAESSEDISPAAVAP
GNGEVEGCLPVVDPVEPPSLADNGSRVTDALSKLNIFDDTPSFFTSPSFQQAPILKNKLD
LEMRQSHLPDLVNDIDGIQKASNTNEWEEAFKNVMMGNTQHMEEQLLQQQHLQQHQNLRH
QLVLQQEEFLRMQELQKRNNFATQINGPANDFLRAYELRAQANAIIQQQLLQQHAGENLF
GGNMSKFFDFHKSQPQSHHQYLNGHPPQINGNGAVPEPQRVAASLESNRLNSPFVENGLI
NSQQQQQQQQQQQKQRMMGMYEFMPPNTQSQQNRFTQNSIVDDDLGFDPFVETQKGLAEL
MENEVVQKQSINNENPLPKLPPQPQVPPHPQLVDNLQRARMPPPGFNHVNTLGLGGASRL
QLTSKIIPFMNMPVNGVGNSGAQGQHQMPMGVNWNAPMGMHQNPGQPVGDSQLQHPMAHN
KVYNNSDWTSMDPAILSFRQYSSFPQNQIPPHPQQQQDLFLQHLAQQQNSQSGGFNNQAQ
QMLPMGMPNSLLNGQQTQPPQVNANVQGMLEFLKSRQFV
NT seq 3180 nt   +upstreamnt  +downstreamnt
atgaacggcctgagcagcaatgatgatgcagtcgagtgccctttgtgtatggagccgctt
gaggtggacgatctgaccttctttccgtgtacctgcggatatcagatttgccgattctgt
tggcataggatccgcacggatgagaacaagctgtgtccggcatgccgaaaggagtatccc
gagaatccagctgacttcaagccgctgtcgcaggaggaaatgattgccttcaagtcccag
aaacgccaaagggaccaacaacgaaaacaaaagatcaccgagaaccgcaaacacttggcc
aacgttcgcgttgtccaaaagaacttggtgttcgttgtggggctaccgccacgacttgct
gatgcagacatattaaagaaacacgagtatttcggtaaatatgggaaaattcataaagtc
gttataaatccaagtaccacgtatgccggggtccagggtccatctgcttctgcgtatgtc
acatatgttaataactcggatgccttgcgggccattcaaagcgtcaataatattatgata
gacggtcggcttataaagaccagcttggggacaaccaaatactgtagccacttcatgaag
aaccagcagtgtcccaagggcgactgcatgtacttacatgaattgggcgatcccgaggcc
agtttcacaaaggaggaaatgcatcagggaaagcacctggagtacgagaagcgcctgcac
gatactctaattgcgtcattgggaccgaatgcaacaggtattgtaaatggtaatggagct
tctaaagcaaatgtcgcgattccatcgtcatcgtcagcgtcatcctcgtcctctggatcg
ggtacaaatggttcaagtgcatcaggtaatgcccagcaaaaggaggcctggccaagctta
tcggtctcgcccatcaatggcaaagaggcggctgccactgcgaccagttccagtgggaaa
agtaaacgggaaaagctgcgcaacgagaagaggcacgagaagaacaaggcgaagaataag
aacggcagcaatacaaacgccaatgcctcgaacaaggagaactatgttcccgaaacgaga
agcagcacaagtactgagacattcgcagaggctacggcggatgcaccggcttccaccaag
gcagaaccgccgcaagcctctagcaatagaacgagggcggatcgtggaaaagatcggacc
acggctagtgcaaaggagcagaagaagagcaaggaagctgctccagcacctgcagcaagt
aaaccggcggagcgggttgaaacaagcgagagtacaataagacaaaagaaggcggaagta
acagaaagctgtgaagataacttaccacaaaagagattagcgggaacaaacgttcaaaga
tctgtgagctcttgtagcgaaaatagcgaaggacacgtctctgagagtagcttaagtgag
aagagtttaactggtgattatgtggaggaaaagtgcaatagtgtgaattcggaaagccag
caagaaagtgtaaagtttcaggaggagctcgaaaagagcaacgaggcaattgtcgaggcc
gaaacgattctgccaacagctgagtcctctgaggacatcagtcccgctgcagttgcgcca
ggcaatggagaagtcgaaggatgcttacccgttgttgatccagtcgaaccaccgagtctg
gcggataatggaagcagagtaacagatgcgctatctaagctgaacattttcgatgacacg
cctagctttttcacatcgccatcattccagcaagcacccatattaaagaataagctagat
ttggaaatgcgacagtctcatttacctgacttggtcaacgacattgatggaatccaaaag
gcatccaatacaaacgagtgggaggaagccttcaaaaatgtgatgatgggcaacacgcag
cacatggaggagcaactgttgcagcagcaacatttgcagcagcatcagaatttgcgccac
cagctggtgttgcaacaggaggagttccttcgcatgcaagaattacagaaacgcaacaac
tttgcgacgcaaatcaacggtcctgcgaatgatttccttagagcttatgagctcagagct
caagccaatgcaatcattcagcaacaattattacaacagcacgcaggcgaaaatctattt
ggcggcaacatgtcgaagttcttcgatttccataaaagtcagccgcagtcacaccatcag
tatctaaatggacatccgcctcaaatcaatgggaacggtgctgtgccggagccgcaaaga
gtggcggcctctttggaaagcaatcgactgaattcgccttttgtcgaaaatggacttatt
aactcgcagcagcagcagcagcagcagcaacagcaacaaaagcagagaatgatgggaatg
tatgaatttatgcctccaaacacgcaatctcagcagaatcggtttacacagaactcgata
gtcgacgatgacttaggattcgacccgttcgttgagacccaaaagggacttgctgaactt
atggaaaatgaggtggtccaaaaacagagtattaataatgagaaccccttgccgaagttg
ccgccacagcctcaagttccaccccatccgcaattggtggacaacctgcagcgagctcgc
atgccgccgccaggcttcaatcacgtcaacacattgggcttgggcggtgcatccagactg
cagctcaccagcaaaataatacccttcatgaacatgcccgtcaatggggtgggcaacagc
ggtgcccagggacagcaccaaatgccaatgggtgtcaactggaatgcgccgatgggcatg
caccagaacccgggacagcccgtgggtgattcgcaattgcagcatccaatggctcacaac
aaggtttacaacaacagtgattggacttcaatggatccggctatactttcgtttagacag
tattcttcttttccacaaaaccaaattcccccacatcctcagcagcaacaggatttattt
ttgcagcatttggctcaacagcaaaattcccagagtggtggtttcaacaaccaggcacag
caaatgcttcctatggggatgcccaatagtttgctgaacggacaacaaacgcagccgcca
caggtcaatgccaatgttcagggcatgcttgagtttttaaaaagccgtcaattcgtttag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (6)   
   Pfam (6)   
All databases (100)   

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