KEGG   Drosophila melanogaster (fruit fly): Dmel_CG44436
Entry
Dmel_CG44436      CDS       T00030                                 
Symbol
sno
Name
(RefSeq) strawberry notch, isoform B
  KO
K26273  protein strawberry notch
Organism
dme  Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:dme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dme03036]
    Dmel_CG44436 (sno)
Chromosome and associated proteins [BR:dme03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    Dmel_CG44436 (sno)
SSDB
Motif
Pfam: AAA_34 Helicase_C_4 ResIII Helicase_C
Other DBs
NCBI-GeneID: 32273
NCBI-ProteinID: NP_001096967
FlyBase: FBgn0265630
UniProt: A8JUV0
Position
X:complement(13195499..13211674)
AA seq 1653 aa
MTSKKRKTLLDADDDNDNFDEDDSGSDFDDDEDPDQIEVPGGGRDLNTAVTYAQNIRSGV
GVAPKGGIPIPISGAKIVVGNNKIKPISLLRINNNNNNIVTSVNNRNNNNIISTNGSSNN
NNNSINNNSQIIKTTTVTTTPTTVGATPTVGGVALGGKLTVIPIAGRNVALDNNLSNMPK
KLNNMVTAMGSPAARSSGNAGTTGSSQGGAIGSTSSYLNSLTTNELMNLAAYVAAKGSNA
PPPPPPSTAANSVRHSPTGGIPNPGGNFFGGSAAASTSASAANFNMAASLLAQMSYAGGA
SQIRALKVAGNIGGVGNNQKPPPIATTPGSGGPAGGAPGSGVKGNNSMMEAVQKLIAMNP
EYLTSGIPNTVFQMFMQSMQRPQATPSPNQPMNPGAMVTSAAAAAAHASAVAYVQQEEDE
VDYEEMGVAETYADYWPAKLKLGKKHPDAVVETASLSSVEPCDVYYKLSLPLETINSGHL
SALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKGRTIAGIIYENYLKGRKKALWIS
VSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDVNNNCKRGVIFSTYSALIGESNN
KTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQKLPKA
RVVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAVERRGVGAMEIVAMDMKLRG
MYIARQLSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEAMQKFTEAAELIDAESRMKKTM
WGQFWSSHQRFFKYLCIAAKVNHAVLVARESIKYGKCVVIGLQSTGEARTLDQLERDDGE
LTDFVSTAKGVFQSFVERHFPAPDRNRINRILGLYDETPSLSSVADSTSSLSNNSNITTA
AGKRKGSNNNDNRSTKIKKKKRSGSWECSDSEDENTDMKRNRKRDGGNSNSDSDEANSDD
DLKSDIDDEDEDHDVDSDQRSVASDASSDFNPFFSGSDSDIDPWVNARSKKSKKAQKKSK
KKVKKEKTKKEITTSSATDPSGSTAMSATVVAALNAVKNRKSQLSTQDKIQDLLQKKQEL
KGTVTPVGVNGVKLNYGPPPKDAIERACTMKEELLRKIERLGARLPPNTLDQLIDELGGP
DNVAEMTGRRGRVVQTDDGSIQYESRTESDVPLETLNITEKQRFMDGEKDVAIISEAASS
GISLQSDRRVFNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERR
FASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRQALETVMRTIMGYESPLVPPP
TDYSGEFFKDIAGALVGVGIIVNSESHPGVLSLDKDYNNISKFLNRILGCPVDLQNRLFK
YFTDTMTAIIQQAKRGGRFDLGILDLGAAGENVTRVRLIRFVRKHATGVAPTEMHTVRVE
RGMIWQEAIDKYADLFNENEGFYLSHQLRNQKRTAIMVVILESRNSSSTSSTTDLDSGSK
KKKTHSKKEIMCQIYRPNTGLQVRHESLFELEKKYRKVASEEAEPHWTEQYDASVNTCSH
AYWNGNCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWGRVEHILNTRSNSKMQVIRMKTTE
GEKIVGTLIPKSCFEPLVADLRSDSEKQEEFNY
NT seq 4962 nt   +upstreamnt  +downstreamnt
atgacatcgaaaaaacgaaaaacactgttggatgccgatgacgacaatgacaattttgat
gaagacgattcgggctccgatttcgacgatgacgaggatccagatcaaatagaagtgccc
ggtggaggtcgcgatttgaacacagccgttacgtacgcccaaaatatccgtagcggagtg
ggcgtggcgcccaaaggcggtatacccatacccataagtggggcgaaaattgttgttggc
aataataaaatcaagccaatatcgttgttgcgcattaacaacaataacaacaatatagtc
accagtgttaacaatagaaacaacaacaatatcatcagcaccaacggcagcagcaataac
aacaacaatagcatcaacaacaacagccagataataaaaacaacaacagtaacaacaaca
ccaaccactgtgggtgctacgccaacagttggaggcgtggcactgggcggaaagctaaca
gtgataccgatagcagggagaaacgtagccctagataataatttaagcaatatgccaaag
aaactgaataacatggtaacggccatgggcagtccagcggccaggagcagcggcaatgct
gggacgactggttcgtcccagggtggtgccatcggctccaccagcagctacttgaacagc
ctgaccaccaacgaactgatgaacctggccgcctatgtggccgccaagggcagcaacgcc
ccaccgccaccgccgccgtccacagccgccaattcggtgaggcattcaccaacaggcggc
attcccaatcccggtggcaatttctttggcggatcggcggcggcgtccacttcagcctct
gctgctaattttaatatggccgcgtctttattggcgcagatgagttatgcaggcggagct
tcccaaattcgcgccttaaaggtagccggaaatattggcggagtcgggaataatcagaag
ccgccaccaatagccacaactcccggaagcggaggaccggctggcggagcacctggtagc
ggagtgaaggggaacaactcaatgatggaggccgtacagaaactgatagcaatgaatccg
gaatacctaaccagtggcataccgaataccgtattccagatgtttatgcaatcaatgcaa
cgtccacaggcaactccgtcgccgaatcagccaatgaatcccggcgcaatggtgaccagt
gcagctgcagcggctgcccacgcctcagcggttgcctatgtccagcaggaggaggatgag
gtcgactacgaggagatgggcgtagccgagacatatgccgactactggcctgcgaaattg
aaacttggaaagaaacatccggatgccgttgtggagacagcatcgcttagctccgttgag
ccctgtgatgtctactacaagctgtctctgccactcgaaacaatcaatagcggccatttg
agcgccctgcaattggagtccattacgtacgcatcccaggcgcacgatcatctgcttccg
gacggcagtcgggctggattccttatcggagacggcgctggtgtgggcaagggtcgcaca
atcgccggcatcatttacgagaactatttgaagggtcgcaagaaggcgctatggatatcc
gtgtccaacgatctcaagtacgatgccgagcgggatctcagcgatattggggcaacgcgt
atcgaggtccatgccctcaacaagtttaaatacgccaaaatcagctccgatgtgaataac
aattgcaagcgtggcgtaatcttcagcacatattccgctttgataggcgagtccaataac
aagacgggcaagtaccgatcccgcttccgtcagcttctgcaatggtgtggtgaggatttc
gagggcctcatcatcttcgacgagtgtcacaaggcgaaaaatctgtgtcccgtgggttct
ggcaaaccaacgaagacgggccagaccgttctggagctgcagcagaaattgcccaaggcc
cgagtggtctatgcatccgcaacgggtgcctctgagcccaagaatatggcttatatggtt
cgtctgggtctctggggtcagggaacggcctttggcaactttaacgactttatcaccgcc
gtggagagacgcggtgtgggcgccatggagatcgtagccatggacatgaagctgcgtggc
atgtacatcgctcgccagctaagtttcaagggcgtgagcttcaaaatcgaggaggttcca
ctctccaaggagtttcgcaagatctacgatcagtccgttgagctctgggtggaggccatg
caaaagttcaccgaggcggccgaactgatcgatgccgagagccgaatgaagaagacgatg
tggggtcagttctggtcctcgcatcagcgctttttcaagtacctttgcattgctgccaag
gtcaaccatgcggtgctggtcgcccgcgagtctataaaatacggaaagtgtgtcgtcatc
ggtctgcagtcgaccggcgaggctcgaactctagatcagttggaacgcgacgatggcgaa
ctcaccgactttgtatctacggctaaaggtgtctttcagtcgtttgtggagcgccacttt
ccggcacccgatcgtaatcgcatcaaccgcatcctgggtctctacgatgagacaccttcc
ttgtcatccgttgccgattccacgtctagcttgagtaacaatagtaatatcaccacagcg
gctggcaaaaggaagggaagtaataacaatgataaccgatccacaaagatcaaaaagaag
aagcgcagtggatcttgggaatgtagcgacagcgaggatgagaatacggatatgaaacgc
aatcgaaaacgggatggaggcaactccaacagcgatagcgacgaggcaaatagtgatgac
gaccttaagagtgatatagatgatgaagatgaggatcatgatgtggacagcgaccagaga
agcgtggctagcgatgctagttccgattttaatcccttcttcagcggcagcgatagcgat
attgacccctgggtgaatgctcgcagcaagaagtcaaagaaggcccagaagaaaagcaag
aaaaaggtgaagaaggagaagaccaaaaaggaaatcaccacctcatcagcaaccgatccc
agtggcagtacggcaatgtccgccactgttgttgctgctctgaatgcggtcaagaatcgg
aaatcccagctctccacacaggacaagattcaggatcttctgcaaaagaaacaagagctg
aaaggcactgtcacgccggtgggtgtgaatggtgttaaactaaactatggtcctccgccc
aaagatgcaattgaacgcgcttgcacgatgaaagaggagctgctgcgcaagatcgagcga
ctgggggcccgactgccaccaaatacgctggaccaattgatcgacgaactgggtggtccc
gataacgtggccgaaatgactggtcgaaggggtcgcgttgtacaaactgatgatggtagc
attcaatacgagtccagaaccgaatcggatgtcccactggaaacgcttaacattacggag
aagcagcgcttcatggacggcgagaaggatgtggcaatcatttcggaagcggcgtccagt
ggtatttcgcttcagagtgatcggcgggtcttcaatcagcgccgacgtgtccacataaca
ttggagttgccctggtccgccgacagagccatccagcagtttgggcgtacccaccgatcc
aatcaggttaatgcgcccgagtacatcttcctcatctcagatttggctggtgaaagacgt
ttcgcttctaccgttgccaagcgtttggaatcgctaggagcgctcacccacggcgatcgc
agggctacggagactcgggatctctcccagtttaacatagacaacaaatatggtcgacaa
gccctggaaactgtgatgcgtaccataatgggctacgagtcaccgctggtgccgccgcct
acggactacagtggcgagttctttaaggacatcgctggagccttggtcggtgtgggcatt
atcgtgaatagcgaaagtcatccgggtgtgctaagtctcgacaaggactacaacaacata
tcaaagtttctcaaccgtattctcggctgtccagtggatctgcagaatcgtttatttaag
tattttacggacaccatgacagcaatcattcagcaggcaaagcgcggcggtcgcttcgat
ttgggcattttggatcttggagctgccggtgagaatgtcacccgcgtccgacttattcgg
ttcgtgcgcaaacatgccaccggagtggcacccacagagatgcacacggttcgagtggaa
agaggcatgatatggcaagaagccattgacaaatatgccgatctgttcaacgagaacgag
ggcttctatctgtcccaccagctacgcaaccagaagcgaaccgccattatggtggtgatt
ctagagtcacgcaacagcagctcgacgagcagtaccaccgatttggacagcggtagcaag
aaaaagaaaactcacagcaaaaaggagatcatgtgtcagatataccgaccaaacactggt
cttcaggttcgccacgaatcgctttttgagcttgagaagaagtatcgcaaggtggccagc
gaggaggctgagccgcactggacggaacagtatgatgcctcggttaacacctgttcgcac
gcatactggaacggcaactgtagaaatgttagcctggggaacgactgtgaggtgggcttg
cgtcaacgtttgtaccacgttctggctggatccgtgctctccgtttggggacgcgtggag
cacatactgaatacacgttccaatagcaagatgcaagtgatacgcatgaagaccaccgag
ggggagaagattgtgggcaccttaatacccaagtcctgcttcgagccattggtggccgat
ttgcgcagtgattcggagaagcaggaggagtttaactactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (58)   

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