KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5444
Entry
Dmel_CG5444       CDS       T00030                                 
Symbol
Taf4
Name
(RefSeq) TBP-associated factor 4, isoform F
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Dmel_CG5444 (Taf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dme03021]
    Dmel_CG5444 (Taf4)
   03036 Chromosome and associated proteins [BR:dme03036]
    Dmel_CG5444 (Taf4)
Transcription machinery [BR:dme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     Dmel_CG5444 (Taf4)
   Coactivators
    SAGA/TFTC/STAGA complex
     Dmel_CG5444 (Taf4)
Chromosome and associated proteins [BR:dme03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     Dmel_CG5444 (Taf4)
SSDB
Motif
Pfam: TAF4 TAFH
Other DBs
NCBI-GeneID: 39765
NCBI-ProteinID: NP_001163453
FlyBase: FBgn0010280
UniProt: P47825 E1JI11
Position
3L
AA seq 921 aa
MNTSQTAAGNRITFTSQPLPNGTISIAGNPGAVISTAQLPNTTTIKTIQAGIGGQHQGLQ
QVHHVQQQQQSQQQQQQQQQTQSAGQPLLNSMLPAGVVVGMRQQAPSQQQQKNVPTNPLS
RVVINSHMAGVRPQSPSITLSTLNTGQTPALLVKTDNGFQLLRVGTTTGPPTVTQTITNT
SNNSNTTSTTNHPTTTQIRLQTVPAAASMTNTTATSNIIVNSVASSGYANSSQPPHLTQL
NAQAPQLPQITQIQTIPAQQSQQQQVNNVSSAGGTATAVSSTTAATTTQQGNTKEKCRKF
LANLIELSTREPKPVEKNVRTLIQELVNANVEPEEFCDRLERLLNASPQPCLIGFLKKSL
PLLRQALYTKELVIEGIKPPPQHVLGLAGLSQQLPKIQAQIRPIGPSQTTTIGQTQVRMI
TPNALGTPRPTIGHTTISKQPPNIRLPTAPRLVNTGGIRTQIPSLQVPGQANIVQIRGPQ
HAQLQRTGSVQIRATTRPPNSVPTANKLTAVKVGQTQIKAITPSLHPPSLAAISGGPPPT
PTLSVLSTLNSASTTTLPIPSLPTVHLPPEALRAREQMQNSLNHNSNHFDAKLVEIKAPS
LHPPHMERINASLTPIGAKTMARPPPAINKAIGKKKRDAMEMDAKLNTSSGGAASAANSF
FQQSSMSSMYGDDDINDVAAMGGVNLAEESQRILGCTENIGTQIRSCKDEVFLNLPSLQA
RIRAITSEAGLDEPSQDVAVLISHACQERLKNIVEKLAVIAEHRIDVIKLDPRYEPAKDV
RGQIKFLEELDKAEQKRHEELEREMLLRAAKSRSRVEDPEQAKMKARAKEMQRAEMEELR
QRDANLTALQAIGPRKKLKLDGETVSSGAGSSGGGVLSSSGSAPTTLRPRIKRVNLRDML
FYMEQEREFCRSSMLFKTYLK
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgaacaccagccagacagctgccggcaatcgcatcaccttcaccagccagccgctgccc
aatggcaccatcagcatagccggcaatcccggcgcggtcatctccacggcccagctaccg
aataccaccaccatcaagacgatccaggcggggatcggtggtcagcatcagggacttcag
caggtgcatcatgtccaacagcagcagcagtcgcaacagcaacaacagcagcaacagcag
acgcaatccgccggtcaaccgctgctcaattcaatgctgccggctggcgtggtggtgggc
atgcgccaacaggcgccgtcacagcagcagcagaagaatgtgcccaccaacccgctcagt
cgcgtggtgatcaactcccacatggcgggcgtgagaccgcagagtccatcgataacttta
agcacacttaatacgggtcagaccccggcattgctggtcaagacggataacggattccag
ctgttgcgcgtgggcacgacgacgggtccgccgacggtgacacagactataaccaacacc
agcaataacagcaacacgacaagcaccacaaaccatcccacaaccacacagatccgtctg
caaactgtgccggctgcagcttctatgaccaacacgaccgccaccagcaacatcattgtc
aattcggtggcaagcagtggatatgcaaactcttcgcagccgccgcatctgacgcaacta
aatgcgcaggcgccacaactgccgcagattacgcagattcaaacaataccggcccagcag
tctcagcagcagcaggtgaacaatgtaagctccgcgggaggaacggcaacggcggtcagc
agtacgacggcagcgacgacgacgcagcagggcaataccaaagaaaagtgtcgcaagttt
ctagccaatttaattgaattgtcgacacgggaaccgaagccggtggagaagaacgtgcgc
accctcatccaggagctggtcaatgcgaatgtcgagccggaggagttttgtgaccgcctg
gagcgcttgctcaacgccagcccgcagccgtgtttgattggattccttaagaagagtttg
cctctgctacgacaagccctctacacaaaggagctggtcatcgaaggcattaaacctccg
ccgcagcacgttctcggcctggccggactctctcaacagttgcctaaaatccaagcgcaa
atccgtccgatcggtcctagccagacaacgaccattggacagacgcaggtgcgtatgata
acgccgaatgccttgggcacgccgcgacccaccattggccacaccacgatatcgaagcag
ccaccgaatattcggttgcctacggccccgcgtctcgtcaacactggaggaattcgcacc
cagataccctcgttgcaggtgcctggtcaggcgaacattgtgcaaatacgtggaccgcag
catgctcagctgcagcgtactggatcggtccagatccgggccaccactcgtccgccaaac
agtgtgcccaccgcgaacaaactcactgccgtcaaggtgggacagacgcaaatcaaagcg
attacgcccagcctgcatccaccctcgctggcggcaatctcaggtggaccaccgccgaca
cccacgctgtctgttttgtctacgttgaactccgcctcgaccacaacgctgcccatacca
tcgttacccacggtccaccttccccccgaagctcttcgagcccgtgagcagatgcaaaat
tcgctgaaccacaacagcaatcacttcgatgcaaaactggtggagatcaaggcgccgtcg
ctgcatccgccgcacatggagcggatcaacgcatctctcacaccgattggagccaagacg
atggcaaggccgccgcctgcgatcaacaaggcgataggcaaaaagaaacgcgacgccatg
gaaatggacgccaaattgaacacatcgagcggaggagcggcgtccgctgcgaactcgttt
ttccagcagagctccatgtcctcgatgtacggtgacgatgatatcaacgatgttgccgcc
atgggaggtgttaacttggcggaggagtcgcagcgaattctcggctgtaccgaaaacatc
ggcacgcagattcgatcctgcaaagatgaggtatttctcaatctcccctcgctgcaagct
agaatacgggcaattacttcggaggcgggactggatgagccgtcgcaggatgtggccgtt
ctgatatcgcacgcctgtcaggagcgcctgaagaacatcgttgagaagttggctgtgata
gcggagcaccgcattgatgtcatcaagttggatccacgctatgagcccgccaaggatgtg
cgcggtcagatcaagtttctcgaggagctggacaaggccgagcagaagcgacacgaggaa
ctggagcgtgagatgctgctgcgggcagccaagtcacggtcgagggtggaagatcccgag
caggccaagatgaaggcgagggccaaggagatgcaacgcgccgaaatggaggagttgcgt
caacgagatgccaatctgacggcgctgcaggcgattggacctcggaaaaagctgaagcta
gacggcgaaacagtcagttcgggagcgggttcaagtggcggcggagtgctaagcagctcg
ggatctgcgccgacgacgttacggcctcgcataaaacgtgtgaacctgcgcgacatgctc
ttctacatggagcaagagcgggagttctgtcgcagttccatgctgttcaagacatacctc
aagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (2)   
   Pfam (2)   
All databases (58)   

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