KEGG   Drosophila melanogaster (fruit fly): Dmel_CG6322
Entry
Dmel_CG6322       CDS       T00030                                 
Symbol
U4-U6-60K
Name
(RefSeq) U4-U6 small nuclear riboprotein factor 60K
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dmel_CG6322 (U4-U6-60K)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dme03041]
    Dmel_CG6322 (U4-U6-60K)
Spliceosome [BR:dme03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    Dmel_CG6322 (U4-U6-60K)
SSDB
Motif
Pfam: WD40 NBCH_WD40 PRP4 ANAPC4_WD40 MIOS_WD40 eIF2A WD40_like K_channel_TID
Other DBs
NCBI-GeneID: 39955
NCBI-ProteinID: NP_648990
FlyBase: FBgn0036733
UniProt: Q9VVI0
Position
3L
AA seq 553 aa
MSDDDDIQYIKRQRTLHYGSLEESERKRQNAAASGAAATTTSGTTASSGAGTTTTGTGGQ
LEDIDSDEDYEESTKKTSNAKQAGAPPPTAATLANKIDDDYFDLEMEMERDKVALLEEFE
RKKRARQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGLGENAINKRQYE
DEERKQQQREQDQATWYHEGPDSLRIARLWLADYSLPRAKDRLVRAREALEVPSAARAGR
MVEMQKKLQSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLR
GHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVA
FHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGR
VWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTN
LISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATT
SFDRTFKLWSPDS
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgtccgatgacgacgatatacagtacattaagcggcagcgaacgctgcactatggatcg
ctcgaggaatcggaacgcaagcggcaaaatgccgcggcgtctggggcagcagcaacaaca
acatcgggaacgacggcatcgtctggggcaggaacaacaacaactggaacaggcgggcaa
ctggaagacatcgattccgatgaggattacgaggagtccacgaaaaagacaagcaacgcc
aagcaggccggagcaccaccacccacagccgctactctggccaacaaaattgacgatgac
tacttcgatctagagatggaaatggagcgcgacaaggtggcgctccttgaggaatttgag
cggaaaaagcgagcacgacagataaatgtgtccacagacgacacggagatcaagagcaat
ctgcgccagctaaacgaacccatttgctattttggagaaggaccggcggagcgaagaaga
cgtcttaaggaactcttggctggattgggcgagaacgccatcaacaagaggcagtatgag
gatgaggagcgcaagcagcaacagcgggagcaggatcaggccacctggtaccacgaggga
cccgatagtttgcgtatcgctcgactctggctggcggattattccctgccgcgcgccaag
gatcgcttggtacgagcacgtgaggcccttgaagtgcccagcgcagcacgtgccggccga
atggtggagatgcagaagaagctccagtcgctggctccactgtgctcccaggtgggtgac
acacggcccgtgagtagtgctgccttcagtgaagactcctcactccttctgacctcctca
tggtcgggtctctgcaagctgtggagcgtgcccgattgcgagctgaagcagacgctgcgt
ggacatgccagctatgtgggcggagtggctctgcggccgggagttaaggcagacgaggag
aacgtggtggccatggcttccggtggccacgatggcgccgtcaagctgtggggcttcaac
aacgaagagtcgattgccgacatcaccggccacatgccgcatcgcgtctctaaggtagcc
ttccatccttccggccgcttcttggccaccgcctgctacgactctagctggcggctgtgg
gatctggagcaaaagacagaggtgcttcaccaggaagggcacgcaaagccggttcactgc
cttagctatcattccgacggcagtgtcctggtcaccggcggtctggatgcctttggacga
gtgtgggatctgcgcactgggcggtgcatcatgtttctggagggacacttgggcgccgtt
ttcggcgtggacttttctccaaacggattccacatagcaacagggtcccaggacaacaca
tgtaaaatctgggacctgaggcgacgccagccggtctataccattcctgcgcacaccaat
ctgatttcggacgtgaagtaccagcaggagtgcggcagcttcctggtcacctgctcctac
gactcgaccaccaagatctggtccaacaagacgtggcagccgttgaagacgctgcagggc
cacgacaacaaggtcatatcggtggacatcgcgcccaactcgcagtatatagccacgacc
tcatttgaccgcacatttaagctgtggtcgccggatagctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (51)   

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