KEGG   Drosophila melanogaster (fruit fly): Dmel_CG7398
Entry
Dmel_CG7398       CDS       T00030                                 
Symbol
Tnpo
Name
(RefSeq) transportin, isoform D
  KO
K18752  transportin-1
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dmel_CG7398 (Tnpo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG7398 (Tnpo)
   03009 Ribosome biogenesis [BR:dme03009]
    Dmel_CG7398 (Tnpo)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     Dmel_CG7398 (Tnpo)
Ribosome biogenesis [BR:dme03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    Dmel_CG7398 (Tnpo)
  Pre-60S particles
    Dmel_CG7398 (Tnpo)
SSDB
Motif
Pfam: HEAT_EZ HEAT Cnd1 HEAT_2 IBN_N Vac14_Fab1_bd Arm Adaptin_N PDS5 Maestro_HEAT MMS19_C CEP104-like_TOG SCD CLASP_N RTP1_C1 Dopey_N XMAP215_CLASP_TOG Htt_N-HEAT_1 DUF3384 MreB_Mbl
Other DBs
NCBI-GeneID: 38721
NCBI-ProteinID: NP_001261472
FlyBase: FBgn0024921
UniProt: Q9VRV8
Position
3L
AA seq 893 aa
MTWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNYLIYVLTKLKTEDE
PTRSLSGLILKNNIRMHGTTLQPEIVEYIKHECLQAVGDASPLIRATVGILITTIASNGG
LHNWPQLLPSLCEMLDNQDYNVCEGAFSALQKICEDSAEILDSAALNRPLNIMIPKFLEY
FKHSSPKIRSHAIACINQFIINRSQALMLNIDSFIENLFHLSSDEDHEVRKNVCHGLVML
LEVRMDRLMPHMSQIIEYMLLRTQDTDEGVALEASEFWLSLAEQSICKDVLAPYLAQLAP
VLVRGMRYSEVDIILLKGNVEEDDMVPDREEDIRPRFHKSRAHTIRSTQEGGAGATGDDD
DDEFEDGMDDDSSLSEWNLRKCSAAALDVLANVFREDCLPVVLPILKETLFHQEWVIKES
GVLALGAIAEGCMQGMIQHLPELIPYLISCLSDKKALVRSITCWTLSRYANWVVNQPHDQ
YLKPLMEELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLEYILKTLVFAFSKYQHK
NLLILYDAVGTLADSVGHHLNKPQYIDILMPPLIDKWNLLKDDDKDLFPLLECLSSIATA
LQSGFLPYCDPVYRRCISLIEQTINQEMLCKQNQTYDHPDKERMIVALDLLSGLAEGLDR
HIETLVANSNIMHLLYQCMQDVLPEVRQSSFALLGDLTKACFPHVHPFMADFFPILGQNL
NPDFISVCNNATWAIGEICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGR
LGYVCPVEVAPYLPEFVRQWCTSLRHIRDNDEKDSAFRGMCHMITVNPAGVVADFIFFCD
AIASWVNPPEDLHQMIQKILHGFKTQVGEENWRRFVEQFPPTLAERLTTMYNI
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgacgtgggaaccacagggagaaggtctgcagcagatcatagcgatcctcaaggagtcg
cagtcaccggacacagccactcaaatggccgtacagatgaaactggaggaattcaatcgc
taccccgacttcaacaactatcttatctatgtgctgacgaaactgaagacagaggacgag
cccacgagatcactcagcggcctaatcctcaagaacaacatccgcatgcacggcaccact
ctgcagccggagatcgtggagtatatcaaacacgagtgcctgcaggcagtgggcgacgct
tcgcccctgatccgtgccaccgtgggcatcctgattaccaccatcgccagcaatggcggt
ctgcacaactggccgcagctgcttccatctctctgcgaaatgctcgacaaccaggactat
aatgtgtgcgaaggcgcattcagtgccctgcagaaaatttgcgaggactctgccgagatt
ttggattccgcagcgctcaacaggccattaaacataatgattccaaagttcctggagtac
ttcaagcacagcagtccaaagatccgctcccacgccattgcctgcatcaaccagttcatc
atcaacagatcacaggctctgatgctaaacatagacagcttcattgagaacctctttcac
ctgtcatcagatgaggaccacgaggtgcgcaaaaacgtgtgccacggattggtcatgctg
ctggaggtgcgaatggaccgtctgatgccgcacatgtcgcagattattgagtacatgctg
ttgcgcacccaggacaccgatgagggtgtggccctggaagcatccgagttctggctttca
ctggccgagcaaagcatctgcaaggacgtgcttgccccttatcttgctcaattagcgcca
gttcttgtacgaggcatgcggtactcagaggtcgacataattctcctcaagggaaacgtt
gaggaggatgacatggtgcccgatcgagaagaggatatccgcccgcgtttccacaagtcc
cgtgcacacacaatcaggagtacacaagagggaggagctggagcgacaggcgatgatgac
gacgacgaatttgaagatggaatggacgacgatagctcgctatcggaatggaacttgcgc
aagtgcagcgcagctgctctcgatgtattggcgaatgttttccgagaggattgtctgccc
gttgtgctgcccatcctgaaagagactctgttccatcaagaatgggtgatcaaagagagt
ggtgtgctggccttgggagctattgcggagggctgcatgcagggcatgatccaacacttg
ccagagctgattccctacctaattagctgcctttccgacaagaaggcactggtgcgctcc
atcacatgctggacgctctcgcgatacgccaattgggttgtcaaccagccgcacgaccag
tacttgaagcctctaatggaagaactgctgaagcgcattctagactccaataagcgcgtt
caggaagctgcgtgctctgcctttgctactctggaggaggaggcctgcacggaactggtg
ccctacctggagtatattctaaagacgctcgtctttgccttctccaagtaccagcacaag
aacttattgatactgtacgatgccgtgggtactttggcggactccgtaggtcatcatctg
aataagccgcaatatattgacatcctaatgcctccgctaattgataagtggaacctgctg
aaggatgacgataaggatctgttcccattgttggagtgcctgtcgagcatcgccactgcc
ttgcagtccggctttctgccctactgcgacccggtgtatcgaaggtgcatctctcttatt
gagcagactatcaaccaggaaatgctgtgtaaacaaaaccaaacgtacgaccatcccgac
aaagagcgcatgattgtcgccctagatctgctgtctggcctagccgagggtttggatcgc
cacatcgagacattggtggccaacagcaacattatgcatctactctaccagtgtatgcag
gacgttttgcctgaggttcgccaatcttcgtttgccctgctgggtgatttgactaaggcc
tgtttcccccacgtgcatcccttcatggccgatttcttccccatcttgggtcaaaacctt
aacccagacttcatttcggtctgcaataatgctacttgggccataggcgaaatctgcatg
aaattgggtgaggagaccaagcagtacatacgccttgtactcagcgaccttttcatcatt
atcaaccgcccgaacacgcccaagacactgctggagaacacagcaataacaatcggtcgt
ctaggttatgtgtgcccagttgaagtggctccttatttgcccgaatttgtacgacagtgg
tgcacatcgttgcggcacatacgagacaatgatgagaaggactcagccttccgtggaatg
tgtcatatgatcacggtgaatccagctggcgtggtagcagactttatattcttctgcgat
gccatcgcttcctgggttaacccaccagaggatctgcatcagatgatacagaagattctg
cacggttttaagacccaagtgggcgaggagaactggcgtcgatttgtggagcaattcccg
ccaaccttggccgagcgcctgaccacaatgtataacatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (20)   
   Pfam (20)   
All databases (67)   

Download RDF
DBGET integrated database retrieval system