KEGG   Drosophila melanogaster (fruit fly): Dmel_CG7764
Entry
Dmel_CG7764       CDS       T00030                                 
Symbol
mrn
Name
(RefSeq) marionette
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03022  Basal transcription factors
dme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Dmel_CG7764 (mrn)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Dmel_CG7764 (mrn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dme03021]
    Dmel_CG7764 (mrn)
   03400 DNA repair and recombination proteins [BR:dme03400]
    Dmel_CG7764 (mrn)
Transcription machinery [BR:dme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Dmel_CG7764 (mrn)
DNA repair and recombination proteins [BR:dme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Dmel_CG7764 (mrn)
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 39688
NCBI-ProteinID: NP_648780
FlyBase: FBgn0261109
UniProt: Q9VUR1
Position
3L
AA seq 499 aa
MADTKSGSGRHSAAGGSGNAVLSPLGQGPANLECKDFQEYLRTRQTPESLEKLYNYPPIC
LAVFRELPEIARQFIIRILFVDQPVPQAVVTSWGAQRCAKEQAEATSCLTALNVWRVTAI
PGGLSAWELSPTFKKSVRQVLLGGGKPWPMTNTLDKDSKPRDIAFLDTYAMSRWRCVLHY
MVGTGNRNGTDAEAISPDAVRILLHANLMKRDERDGITITRQGFQFLLLDTRAQVWHFML
QYLDTCEERGISLPECLSMLFQLSFSTLGRDYSSEGMNSQMLTFLQHLREFGLVFQRKRK
EGRFYPTRLALNVTSKEAAATASVAMDEEATQDCGYIVVETNYRVYAYTDSPLQVAVLGL
FTELLYRFPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYAHPNMRMVESAIHSKSCLP
PTVVDQIKLWELERNRFTYTEGVLYNQFLSHTDFVTLRDYAQSIHMLVWQNERTRTMVVQ
KNGHDDVKRYWKKYSKSGV
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggccgacacgaaatccggtagtggtcggcattcggctgccgggggaagtggaaacgcc
gtcctgtcgcccttggggcagggtcctgcgaacttggagtgtaaggactttcaggagtat
ctgcgcacccgccaaacgccagagtcgctggagaagctgtacaactatccgcccatttgt
ttggccgtttttcgggagcttccagagatagcccggcagtttatcataaggatactgttc
gtggatcagcctgtgccacaagcggtggtcacatcatggggtgcccaacgttgtgccaag
gagcaagccgaggcaaccagctgcctgacggctttgaacgtctggcgggtcacagccatt
ccgggtggcctttctgcgtgggagctctcgcccaccttcaagaaaagcgtacgccaggtg
ctgctgggcggcggaaaaccttggcctatgaccaacacgctggataaggactcgaagccc
agggacattgcttttctggatacatacgccatgtcccgctggcgttgcgtgttgcactac
atggtcggcaccggaaatcgcaatggcaccgatgcggaggccattagtccggacgccgtt
cggattctgctgcacgccaatctcatgaaacgtgatgaacgagacggtatcacaataacc
cggcagggctttcagttcctgctgctggacacgcgagctcaggtgtggcattttatgcta
cagtacctggacacgtgcgaagaaagaggaatcagcctgccggaatgcttgtccatgttg
ttccagctcagtttttcaacgctgggcagggattacagttccgagggcatgaacagtcag
atgctgacattcctgcagcatctacgggagtttggactggtcttccaacgtaagcgtaag
gagggacgcttctatcccacacgtttggctctgaatgtgacaagcaaggaggcggctgcg
actgcatctgtggccatggatgaggaggccactcaggactgtggctacattgtggtggag
acgaactaccgagtgtatgcctacactgattctccgctccaggtagccgtgttaggtctg
ttcacggagcttctctaccgctttcccaatctcgtcgtgggcgtgctaacccgcgattca
gtgcgccaggcgttgcgtggcggtatcacggcagagcagattgtctcgtatctggagcag
tatgcgcatcccaatatgcgcatggtcgagtcagccattcactctaaatcctgcctgcca
cccacagtcgttgatcaaattaagctgtgggaattagagcgaaatcgcttcacctacacc
gaaggcgtgctgtacaatcagttcctctcgcatacagatttcgtaacgctacgagactac
gcccagtcgatccacatgctggtgtggcaaaatgagcgaactcgcacaatggtggtgcaa
aagaatggccacgacgatgtcaagcgttactggaagaagtactctaagagtggtgtttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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