KEGG   Desulfosporosinus meridiei: Desmer_2666
Entry
Desmer_2666       CDS       T02207                                 
Name
(GenBank) Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
dmi  Desulfosporosinus meridiei
Pathway
dmi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Desmer_2666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dmi03400]
    Desmer_2666
DNA repair and recombination proteins [BR:dmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Desmer_2666
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2 GIY_YIG_2 DUF6384
Other DBs
NCBI-ProteinID: AFQ44578
UniProt: J7IZS5
Position
2804531..2806294
AA seq 587 aa
MNLLRQKLSLLPEKPGVYLMKDNQAQIIYVGKAKVLKNRVKSYFTGSHDGKTARLVSQIS
DFEYITTDSEVEALVLECNLIKKYNPKYNILLRDDKSYPYLSITEESHPRVLVTRQLKKD
KSKYFGPYPNATAAREAARLLNRLFPFRKCRQIPSQPCLYYHLDQCLAPCIQEVPPEVYK
EMRKEISTFLKGDQSGILTLLQGKMIKASEALQFERAKEYRDLIEDLKQLGEKQNITLND
FIDRDVLGFATTTDQMCIQVFYLRQGKLLARDNFIFPYYEDPEEAFISFVAQFYIERAVW
PKEILIPAIESLALSKLFPITTPQKGKKRELVLMAMTNAQTTLHDQITLEINQQQETGDA
LNTLGELLNISVPRRIEAFDISNISGAHTVAGMVQFIEGKPERRGYRKYKIQPMDTSDDT
AAMKQVIFRRYKRLVSENETLPNLILVDGGKGQIRAALSALKEINLVIPVAGMVKNERHQ
THGLINQFGEQVLLPKNHPTFFLLGRIQDEVHRFAITFHRQQRAKNMTFSILDDIPGIGP
RRKQQLLHHFQSLEDIQSASIVELQASGIPYNTAKTIYDYFSSGDKK
NT seq 1764 nt   +upstreamnt  +downstreamnt
ttgaatctgcttcgacagaagctatccttgttgccagaaaaacctggcgtttatttaatg
aaagataatcaagctcaaattatttatgtcgggaaagcaaaagttcttaaaaaccgagtt
aaatcatatttcaccggttcacacgacgggaaaactgcccgactagtcagtcaaatttca
gattttgaatatatcacaacagattccgaagttgaagctcttgtcttagagtgtaattta
attaagaaatacaacccaaaatacaatattctgttgcgggatgataaatcttacccctac
ctatcgattaccgaagaaagtcaccctcgagttcttgtaacacgacagttgaagaaagat
aaaagtaaatactttggtccttatcctaatgcaacggcggctagggaagcagctcgtttg
ctaaatcgactatttccttttcgaaaatgtcgtcaaatcccctcccaaccctgcctttac
tatcatttagaccagtgccttgccccttgtattcaagaggttccccctgaagtctataaa
gaaatgcgcaaagagatatcaacttttctaaaaggggatcaaagtggtatccttactctc
ttacaagggaaaatgattaaagcttctgaagctctacaatttgaacgagccaaggaatac
cgagaccttattgaggatttgaagcagttaggagaaaaacaaaacatcacgctcaatgat
tttattgatcgcgatgttttgggttttgcaacaactactgaccagatgtgtattcaagta
ttttatttgcgtcaaggaaaattgcttgctagagataattttatttttccctattacgaa
gatccggaagaagcttttatttcttttgttgctcagttttatatagaacgggcagtatgg
cctaaagaaatcttaattccagccattgagtccttggctttatccaaactcttccctatc
acaactcctcagaaagggaaaaaaagagaattggtactaatggccatgacaaatgctcaa
accactcttcatgaccaaatcactctggaaattaatcaacaacaagaaacaggtgatgct
ctaaatacacttggggaactcttaaatatttcagttcccagaagaattgaagcctttgac
atttccaatatttcaggagcacacactgttgctggaatggtacaatttattgaaggtaaa
cctgaacgcagaggttatcgtaaatataaaatccaacccatggatacttctgatgatacc
gctgccatgaagcaagtaatttttcgcagatataaacgattagtttccgaaaacgaaact
cttcctaacttaatattggtggatggggggaaagggcaaataagggcagcattaagtgcc
ttaaaggaaattaatctagtaattccagttgccggaatggttaaaaatgaacgtcatcaa
acccacggactaattaatcagttcggggagcaggtactattaccgaagaatcatcctacg
ttttttttacttggcagaattcaggatgaagtccaccgctttgctattacatttcatcgt
cagcagcgggccaaaaatatgactttttcaattctggatgatattccgggaatcggtccg
agacgtaagcaacagctgttacatcattttcagtcacttgaagatattcagtctgctagc
atcgtggaactacaagcttccggaatcccttacaatactgctaaaacaatctacgattat
tttagctcaggtgataaaaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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