KEGG T01062: Dmoj

Drosophila mojavensis: Dmoj_GI15043

Entry

Dmoj_GI15043      CDS       T01062

Name

(GenBank) uncharacterized protein

K20099

ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]

Organism

dmo Drosophila mojavensis

Brite

KEGG Orthology (KO) [BR:dmo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dmo03041]
    Dmoj_GI15043
Enzymes [BR:dmo01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Dmoj_GI15043
Spliceosome [BR:dmo03041]
Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    Dmoj_GI15043

SSDB

Motif

Pfam:

Helicase_C DEAD HA2_C R3H OB_NTP_bind AAA_19 HA2_N AAA_22 FtsK_SpoIIIE nSTAND3 T2SSE AAA_30

Other DBs

NCBI-ProteinID:

EDW07110

FlyBase:

FBgn0137793

UniProt:

B4L3I2

AA seq 973 aa
MTNKKPKTGRIRRNKTKSKNDVGEVIESNPAPTPKPKTKQKSKLNTDKTNNLDQQKLTFE
QIHRLQQIVLDFIKGDEPCQEIFGLSNMERKEIHHFARQQGVKTRSRNDGGDRVLTLSRS
NTYRLNACLDDVRLSVTLQFGRVLHKALNELGRRRTVPMQPQRRNEPLVQTGGLLGIPRV
PAFSRCTNPTLIAERKDLPIYTKRNRIFQLLEMSQVLIINGATGSGKSTQLPQYLLEDAA
AMKKPVRIVVSQPRRIAAISVSGRIAEERGESLGDTVGYIIRMESKYSNNTVLSLTTSGC
LLRTLAMNGSEFFENTTHLVIDEVHDRDLDTDFLLLAIKLELERNKSLKVILMSATMDLL
ALSKYFDDAPVLNVEGRSFNVRVYSLEDILYMTGYLTPQMSSLLGNHKNLEGEQLVRAYS
LAHNINEQEIDNSLIVSLLQVLLLMGMKGAVIVYLPGYQDMTKLMDQLQTALPTDLVKVL
LLHSQVDSQRQRDVFREYPNVQLKVVLSTNIGQTSITIPDLLYVIDTGRVKMKTYDPSTG
ASHLACTWISKADAQQRTGRAGRRMDGICYRLYSNTQFESFNCFTVPEILRHTLDEICLL
AKIAAPNKPIEQFLAQALDRPQPAAIAQSCAKLKLLGVLRDEDESVTQLGQIIAELPLDV
QLAKCLVYGIYYQCVGSLSIITAYYSVRDPFVLPSDRSGRTEQRKSRDFFSIDASSDSIG
VLQLYHAYMSADTRGSREMDRFCERNCLCRKSMDNFVSAVHTLRLTLMRIIKFVNINMAT
RYDNNLNMVRLALAAGLYPRIVYVDHPRHSRLVDESDPRVQLSRNSILPLCFAKRVKSNM
SEWLVYVEKTRSAGLVSHIEHATLISSLMVALQCGKTVKLEQYVPELLFNEDETYNKVEQ
SILRLDSYLSIRLSTELGSNLIRLRSHIAREFDEMVASRTMVPSRCPSVDYVQRLLALDT
DMSGLSATDIIFY

NT seq 2922 nt +upstreamnt +downstreamnt
atgacaaataaaaagccaaagaccggccgaattcgccggaacaagactaaatcaaagaat
gacgtcggagaagtcatagagtcaaatccggcaccgacaccaaaacctaaaaccaaacag
aaatccaaattaaatacggacaaaactaacaatcttgaccaacaaaagctgacatttgaa
cagatacatcgtctgcagcagattgtgctcgattttataaaaggagacgagccgtgccaa
gagatattcggcttaagcaatatggagcgtaaagagatacaccattttgctaggcagcaa
ggcgtaaaaacgcgcagccgtaacgatggcggcgaccgggtgctaacactcagccgcagc
aatacctaccggctgaacgcgtgtctcgacgatgtcaggctgtcggtgaccttgcagttc
ggccgtgttctccacaaggcactaaacgagctgggccgccgcaggacagtgcccatgcag
ccgcaacgtcgcaacgagccgctcgtccaaactggaggtctgctgggcataccgcgcgtg
ccggcattttcgcgctgcactaatccaacgctgattgccgaacgcaaggatctgcccata
tatacaaagcgcaaccgcatcttccagctgcttgagatgtcgcaggttcttattattaac
ggcgccacaggctccggcaagtcgacccaattgccgcagtatctgctcgaggatgcggca
gccatgaaaaaaccggtgcgcattgtggtcagccagccgcgccgcattgccgccatcagc
gtgtccgggcgcattgccgaagagcgtggcgagtcgctcggcgacaccgtgggctatata
atacgcatggagagcaagtacagcaataacactgtgctgtcactgaccacaagtggctgc
ctgctgcgcaccctggccatgaacgggtccgagttctttgagaatacaacacatctggtt
attgatgaggtccacgaccgcgatctagacacagacttcctactactagccattaagtta
gagctcgagcgtaacaagtcgctcaaggtgatactcatgtcggccaccatggatctgttg
gccttgtccaaatactttgatgatgcacccgtcctcaatgtggagggtcgtagcttcaat
gtgcgcgtctattcgctggaggatatactatacatgactggctacttgactccgcagatg
tcgagtctgctgggcaatcacaagaatcttgagggcgagcagctggtgcgcgcctattcc
ctggctcacaacatcaacgagcaggagattgacaactcgttgattgtgtcgctgttgcag
gtgctgctgctcatgggcatgaagggcgccgttattgtctacttgcctggctaccaggac
atgaccaaattgatggatcagctgcaaacggctctgcccacagacttggtcaaagtcctg
ctactgcacagccaggtcgacagccagaggcagagggatgtctttcgtgaatatccaaac
gtccagctcaaggtggtgctcagcaccaacattggccaaacctcgatcaccatacccgat
ctgctgtatgtgatcgatacgggtcgcgtcaagatgaagacctacgacccatcgactggt
gcctcacatctggcctgcacctggatatccaaggcggacgcacagcagcgcaccggacgt
gccggcaggcgtatggatggcatttgctatcgtctgtacagcaacactcagttcgagtcc
ttcaattgcttcaccgtgccggagattttgcgccatactctcgacgagatctgtctcttg
gccaagattgcagccccgaacaagcccatcgaacagttcctggcccaggctctggatcgt
ccgcagcccgccgccattgcacagtcgtgcgccaagctaaagctcttgggcgtgctgcgc
gatgaggacgagagcgtcacccagctgggccaaatcatagccgagctgccgctggatgtg
cagctggccaagtgcctggtctatggcatctactaccaatgcgtgggcagcctgagcatc
attaccgcctactactcggtgcgtgatccgtttgtgctgcccagcgatcgctccggacgc
accgagcagcgcaagtcgcgcgacttctttagcattgatgcgtccagcgattcgattggg
gtccttcaactatatcatgcctacatgtccgccgacaccaggggcagccgcgaaatggac
agattctgcgagaggaactgcctctgccgcaaatccatggataatttcgtctcagctgtg
cacaccctgcgcctcactctgatgcgcataatcaagttcgtgaacataaatatggccacc
aggtatgacaacaacctaaatatggtacgtcttgccctagcagctggcctctatccgcgc
atcgtctacgtcgatcatccgcgtcactcccgtctggtcgacgagagcgatccacgtgtc
cagctctcccgcaactctatcttgccgctatgtttcgcgaagcgcgtcaagagcaacatg
agcgaatggctcgtgtacgtggagaagacccgctcagccggcctcgtctcgcacattgag
catgccacgctgatcagctccctgatggtggcgctgcaatgcggcaagacggtcaaactg
gagcaatatgtgccggagttgctgttcaacgaggacgagacctacaataaagtggagcaa
agcatcctgcgcttggactcctacctcagcattcgcctctccactgagctgggctccaat
ctgatcaggctgcgctcccacattgcccgggagtttgatgaaatggtcgcctcccgcacc
atggtgccctcacgctgtccatccgtcgactatgtccagagactgctggccctcgacacc
gacatgtcgggcctatcggccacagacattatattttactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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