KEGG   Desulfurococcus mucosus: Desmu_0223
Entry
Desmu_0223        CDS       T01406                                 
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
  KO
K03124  transcription initiation factor TFIIB
Organism
dmu  Desulfurococcus mucosus
Pathway
dmu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Desmu_0223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmu03021]
    Desmu_0223
Transcription machinery [BR:dmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Desmu_0223
 Prokaryotic type
  Archaeal type
    TFB
     Desmu_0223
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_C HTH_Tnp_ISL3 Sigma70_r4 HTH_23 Sigma70_r4_2 HTH_AsnC-type RB_B
Other DBs
NCBI-ProteinID: ADV64542
UniProt: E8R7P7
Position
209818..210765
AA seq 315 aa
MFTDTPTQSPEAQSSGEESKKPKCPQDKIVYDAAHGEYVCQDTGEVIEEKVIDERPEWRA
FTPEERGRRARTGGPVTAAVHDMGFATSIDYTDRDAAGRRLTEKKHELVKLRKWQARTRI
LTSVERNLAQAMNELDRLADVLNLPSYVKEEAARIYREAVDRGLVRGRSIESVIAAAIYL
ACREMKVPRSLDEITRHTRIGRKEIARCYRLLLRELRIKVSTTDPADYVPRIVHGLGLPG
QAVKLAIEIINTAKEHGVTGGKDPAGLAAAAVYMAAERLGEKKTQKEIAHIAGVTEVTVR
NRYKELAKVLGVEYE
NT seq 948 nt   +upstreamnt  +downstreamnt
gtgtttacagatacacccactcagtctcctgaagcccagtcaagtggggaggagagtaag
aagcccaagtgtcctcaggacaagatagtgtatgatgctgcccacggcgaatacgtgtgc
caggacactggtgaagtaatagaggagaaggttatagatgagaggcctgaatggagggcc
ttcactcctgaggaaagaggtaggagggctaggaccggcgggcctgtcacagcggcagtc
cacgacatggggttcgcgacgtcaatagattacactgaccgcgatgcagctggcagaagg
ctcactgagaagaagcatgagttggtgaagctgaggaagtggcaggcgagaacaaggata
cttacaagtgtagagagaaatctggcgcaggccatgaacgagctggacaggcttgcagac
gtcttgaacctgccttcctatgttaaagaggaggcagctaggatttaccgcgaggcggtt
gacagggggctcgtcaggggtagaagcatagagagcgttatagcggcggccatatatcta
gcatgccgagaaatgaaggtaccccgatccctcgacgagataacgaggcatacaaggatt
gggaggaaggagatagcaaggtgctaccggttactgttaagggagctcaggataaaggtg
tcaacaacggatccagcagactacgtccccaggatagtgcacgggcttggattaccgggt
caagcagttaagttagccattgagataataaacactgctaaggagcacggtgtaacagga
ggtaaggatccagccgggctcgcggctgcagccgtatacatggcggctgagagactaggc
gagaagaagactcagaaagagatagcccatatagcaggtgtcacggaggtaaccgttagg
aacaggtataaggagctcgccaaagtgcttggcgtggaatacgagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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