KEGG   Dermacoccus nishinomiyaensis: HX89_11090
Entry
HX89_11090        CDS       T03223                                 
Name
(GenBank) glycyl-tRNA synthetase subunit beta
  KO
K14164  glycyl-tRNA synthetase [EC:6.1.1.14]
Organism
dni  Dermacoccus nishinomiyaensis
Pathway
dni00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dni00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HX89_11090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dni03016]
    HX89_11090
Enzymes [BR:dni01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     HX89_11090
Transfer RNA biogenesis [BR:dni03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    HX89_11090
SSDB
Motif
Pfam: tRNA_synt_2f tRNA-synt_2e DALR_1
Other DBs
NCBI-ProteinID: AIF41398
UniProt: A0A075JML2
Position
complement(2375276..2378323)
AA seq 1015 aa
MQDALLTLQKYWTDRGCMVVQPYNTEVGAGTMNPNTVMRVLGPEPWHVAYVEPSVRPDDS
RYGENPNRLQTHTQFQVILKPDPGNPQELYLGSLEALGIDLDAHDVRFVEDNWQQPAIGA
WGLGWEVWLDGMEVTQFTYFQQVVGQNLEPVAVELTYGMERILMALQGVTHFKDMAYAEG
ISYGEVFAQNEYEMSRYYLDDADVDAARAFFKEYTDEAQRLIDARLPVPAWTYVLKSSHA
FNILDSRGAVSTTERARSFSLMRRLARETGALWTERRAELGHPLLKGDAATSRVRELAEA
AASAPNVTQPVEKPEPAPTAAELGDAPQTFTFEIGVEEMPPHVLDATIPAVRDAVTSALA
GTRLEHGDVAVVGTPRRIVVTVPGVSAHEPDSETLAKGPKVAAAYKDGAPTKALEGFARG
KGVSVDDVVTAEFDGAQHVAVKQTQTGRGVLEVLGEIVADVVSGLRSDKNMKWNDPQLTF
SRPIRWVVALWGKHVVPATVGSLTTGRTTYVARTAAQPHVDVAAADELVPTLETAGFVLD
PTARRRQVVDGALALAKSVGGTIDIDGEAGLVDEITNLVEEPHGVLGTFEERYLELPEQI
LTTVMRKHQRYLPVRDASGTLMPYFVTMANGSIDDDVVRAGNESVLRARYEDAAFFWEAD
LKVPLDDFRAQIDKLTFENRLGSFAQRADRIKDVSMKLAASVELTGDEQATLSRAGALAK
FDLSTAMVVELSSLAGTMAREYALKAGEAPAVADALFEMEKPRSAGDSLPASTPGALLAL
ADRFDLLTAMFAIGAKPTGSSDPFALRRAALGVVSILRGVPAVAAISVSDGLDAAAARLR
EQGVEVSGEALASALEFVEGRFGHQLRDEGVSAALVTALSPSAGTPGRAAAVLADVEALR
DDEAFRALVQVTQRITRIVPAGTQPGFDVSVLTDEAEKTLAPLVEALPDHSGDSLTQWFA
DASGLTEPLNRFFDDVLVMADDEALKAARLGLLQSVIAKAPAGIDYKELDRALDV
NT seq 3048 nt   +upstreamnt  +downstreamnt
atgcaagatgccctgttgacgctgcagaagtactggaccgaccgcggatgcatggtcgtg
cagccctacaacaccgaggtcggtgcggggacgatgaaccccaacaccgtcatgcgcgtg
ctcgggcccgagccgtggcacgtcgcgtacgtcgagccctccgtgcgcccggatgacagc
cgctacggcgagaacccgaaccggctgcagacgcacacgcagttccaggtcatcctcaag
cccgacccgggcaacccgcaggagctctacctcggctcgctcgaggcgctcggcatcgac
ctcgacgcgcacgacgtgcgcttcgtcgaggacaactggcagcagcccgccatcggcgcg
tggggcctgggttgggaggtctggctcgacggcatggaggtcacgcagttcacatacttc
cagcaggtcgtcgggcagaacctcgagcctgtcgccgtcgagctgacgtacggcatggag
cgcatcctcatggcgctgcagggcgtcacgcacttcaaggacatggcgtacgccgagggc
atcagctacggcgaggtgttcgcgcagaacgagtacgagatgtcgcgctactacctcgac
gacgccgacgtcgacgcggcccgcgcgttcttcaaggagtacaccgacgaggctcagcgc
ctcatcgacgcacgcctgccggtgccggcgtggacgtacgtgctcaagagctcgcacgcg
ttcaacatcctcgacagccgcggcgccgtctccacgacggagcgtgcgcgctcgttctcc
ctcatgcgccgcctcgctcgcgagaccggtgcactgtggaccgagcgtcgcgccgaactc
ggtcacccgctgctcaagggcgacgcggcgacgtcacgcgtgcgtgagctggcggaggcg
gccgcgtcggcgcccaacgtcacccagcccgtcgagaagcccgaaccggcgcccaccgca
gccgaactcggcgacgcgccgcagacgttcacgttcgagatcggcgtcgaggagatgccg
ccgcacgtgctcgacgcgacgattcccgccgtgcgtgacgccgtcacgtcggcgctcgcc
ggcacccgcctcgagcacggcgacgtcgccgtcgtcggcacgccgcgccgcatcgtcgtc
accgtgcccggggtcagcgcgcacgagccggactccgagaccctcgccaagggcccgaag
gtcgcggccgcctacaaggacggtgcgccgacgaaggccctcgagggcttcgcgcgcggc
aagggcgtctccgtcgacgacgtcgtcaccgccgagttcgacggtgcccagcacgtcgcc
gtcaagcagacgcagacggggcgcggtgtgctcgaggtgctcggcgagatcgtcgccgac
gtcgtctccggcctacgcagcgacaagaacatgaagtggaacgacccgcagctgacgttc
agccgcccgatccgctgggtcgtcgcgctgtggggcaagcacgtcgtccccgcgacggtg
ggctcactcaccacgggccgcacgacgtacgtcgcgcgcaccgcagcgcagccgcacgtc
gacgtcgccgctgccgacgagctcgtcccgacgctcgaaacggccggtttcgtgcttgac
ccgaccgcgcgacgccggcaggtcgtcgacggtgccctggcgctcgcgaagagcgtcggc
ggcacgatcgacatcgacggcgaggcgggcctcgtcgacgagatcacgaacctcgtcgag
gagccgcacggtgtgctcggcaccttcgaggagcgctacctcgagctgcccgagcagatc
cttaccaccgtcatgcgcaagcaccagcgctacctgccggtgcgcgacgcctccggcacg
ctcatgccgtacttcgtcacgatggccaacggctcgatcgacgacgacgtcgtgcgcgcc
ggcaacgagtcggtgctgcgggcccgctatgaggacgcggcgttcttctgggaggccgac
ctcaaggttccgctcgacgacttccgcgcgcagatcgacaagctgacgttcgagaaccgt
ctcggttcgttcgcgcagcgtgcggaccgcatcaaggacgtgtcgatgaaactcgctgcg
tccgttgaactcacgggcgatgagcaggcaacgttgtcgcgtgccggcgcgctcgcgaag
ttcgacctgtcgacggcgatggtcgtcgaactgtcgagcctcgccggaacgatggcgcgc
gaatacgcgctgaaggcgggggaggccccggctgtggccgatgccctgttcgagatggag
aagccgcgctcggcgggcgactcgctgcctgcatcaacgccgggcgcgctgctcgcgctg
gccgaccggttcgatctgctcaccgcgatgttcgccatcggcgcgaagccgaccggctcg
tccgacccgttcgcgctgcgccgcgcggcgctcggcgtcgtgtcgatcctgcgcggtgtg
ccggccgtggccgccatcagcgtgagcgacggtctcgacgctgccgccgcgcgactgcgt
gagcagggcgtcgaggtctcgggcgaggcgctcgcatcggctctcgagttcgtcgagggc
cgcttcggccatcagctgcgcgacgaaggcgtctcggcggcgctcgtcacggccctcagc
ccgagcgccggaacgcccggtcgcgcggccgcggtgctcgccgacgtcgaggctctgcgc
gatgacgaggcgttccgcgccctcgtgcaggtgacgcagcgcatcacgcgcatcgtgcct
gcgggcacccagccgggcttcgatgtgtccgtgctcaccgacgaggccgagaagacgctg
gctccgctcgtcgaggcactgcccgaccactcgggtgactcgctgacgcagtggttcgcg
gacgcctcgggtctcaccgagccgctcaacaggttcttcgacgacgtcctcgtcatggct
gacgacgaggcgctcaaggccgctcgcctcggcctgctgcagagcgtcatcgccaaggcg
ccggccggcatcgactacaaggaactcgaccgggcgctcgacgtctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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