KEGG   Dokdonia sp. MED134: MED134_05519
Entry
MED134_05519      CDS       T03275                                 
Name
(GenBank) pseudouridylate synthase
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
dok  Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:dok00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dok03009]
    MED134_05519
Enzymes [BR:dok01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     MED134_05519
Ribosome biogenesis [BR:dok03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    MED134_05519
SSDB
Motif
Pfam: PseudoU_synth_2 FliC Herpes_IR6
Other DBs
NCBI-ProteinID: EAQ40187
Position
416627..417199
AA seq 190 aa
MHRHFKLFKPYGYLSQLITNDARQARKKKFLKEFYDFPEGTMAVGRLDEHSEGLLFMTTD
GKLSHTINTSGVEKEYYAQVDGAITDEAILALTQGVEISVEGKKYITKPCKARRIDGDPG
FPERSKKIRDLRHGPAPWISITITEGKFRQVRKMTSAVGFATLRLVRIKIGSQTLKGLEP
SQVIEVKELL
NT seq 573 nt   +upstreamnt  +downstreamnt
atgcatagacacttcaaattgtttaaaccgtatggctatttaagtcagctcattactaat
gatgcaaggcaagctcgtaaaaagaagtttttaaaagagttttatgattttccagaaggc
acaatggctgtaggacgacttgatgagcactctgagggactattgtttatgactacagac
ggtaagctatctcacactataaacacttctggggtagaaaaagagtattatgctcaggta
gatggcgctattacagatgaggctattctcgcattaactcaaggagtagaaataagtgta
gagggtaaaaaatatataacaaagccttgtaaagctagacgtatagatggtgaccctggt
tttccagaacgttcaaaaaagataagagacttacgacacggtccagcaccgtggatctca
attaccattactgagggtaaatttagacaagtacgtaagatgactagcgccgtaggtttt
gctacactacgacttgtaagaataaaaataggctcacaaaccctaaagggtctggagcct
agccaagttattgaggtaaaagaattactttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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