KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0777300-00
Entry
Os01t0777300-00   CDS       T02163                                 
Symbol
Os01g0777300
Name
(RAP-DB) DNA repair protein (XPGC)/yeast Rad family protein.
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Os01t0777300-00 (Os01g0777300)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dosa03032]
    Os01t0777300-00 (Os01g0777300)
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os01t0777300-00 (Os01g0777300)
DNA replication proteins [BR:dosa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Os01t0777300-00 (Os01g0777300)
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Os01t0777300-00 (Os01g0777300)
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 MIT 5_3_exonuc DUF3701
Other DBs
RAP-DB: Os01t0777300-00
Position
chr01:join(32893435..32893595,32894331..32894450,32894720..32894843,32894966..32895103,32895234..32895443,32895827..32896001,32896259..32896332,32896779..32896905,32897197..32897543,32897651..32897705,32897829..32898124,32898222..32898273,32898482..32898689,32898806..32899229)
AA seq 836 aa
MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRHIEYCM
HRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECYQ
KAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS
RIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRAH
ALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIVHLSGIPHG
SSEDLDFLGPWLPQTVAKGIAQGNIDPITKEPFEGKTESSALAFDKVHLNRESSAPSNGK
KKLDLPVQRNVLTNYFCLASLEAKRKFRAPKVTPKQQVLNGSLPSPRIEDSGTPDLIEDT
SLPSNNIQVYQCSSEHFSSGTPLDDSINTASQCSSERVRCDIPRDDSASVSPQCSHDIGS
DPAEDPDIEGNKVKVNFCNRSTIPTGSFLEGTLPGISDPFLDSHNTEPSRAAPRYAEKSN
VVSANRNITVRSSYFKTVNKRVCTNQGEDECHDEDNCETGNYTLPGDQQRSSGGILKRRK
FSDPQNFEDGMFQPTSPHESPPVADKGCDSDSHDGINTNSEGKFGCNVAHVNKYSGIAEK
SMDKFAALISSFRYAGSRASGLRAPLKDVKNTLPVRSVLRPPEQRFGCTAKKTTRVPLQS
RFSSDATNSTDVPDLSTFAYRPTTASAHSDQGKITSKATDAAAGPPDLRTFAYAPTRSTT
SRFDQSENTRKAMCTADSPPDISTFEYKPMKSAVRRSDGSKFSGAALKAARRTSRS
NT seq 2511 nt   +upstreamnt  +downstreamnt
atggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcggggtggag
gcgctcaagggccagacggtggccgtcgacacctactcctggctccacaagggcgccctc
tcctgcggcgaccgcctctgcaagggcctacccaccaccaggcatattgagtattgcatg
catagggttaacatgttgcggcaccatggcgtgaaaccaatccttgtatttgacggaggt
catctgccgatgaagggtgatcaagagactaaacgtgaaaggtcacgaaaggaaaatctt
gagcgtgccaaggagcatgaatctgctgggaattcacgtgctgcttttgagtgttatcag
aaagctgttgacattacacctaggattgcttttgaactgatccaggtattgaagcaagaa
aaggttgattatattgttgcgccttatgaagcagatgcacaaatgacattcttgtctgtg
aacaaacttgttgatgccgttatcacagaggattctgatctgataccatttggctgttct
agaattattttcaagatggacaagtttggacaaggtgttgaatttcatattacacgattg
cagcgatgcagggagcttgatcttaatggattcactatgcaaatgctactagagatgtgt
attttaagtggctgtgattatcttccatcattgcctggaatgggtgtgaaacgagctcat
gcacttatccaaaagctcaagggtcatgaaaaggtaatcaagcacctgaggtacagtgct
gtttctgttccacctcaatatgaagaaaacttcagaaaggcgatctgggcatttcagttc
caaagagtttatgaccctgtgacggaagatattgttcatttgtcaggcattccccatggc
agtagtgaagacttggactttttgggcccatggctaccacagactgttgctaaaggcatt
gcccaagggaatatcgatccgattaccaaggaaccatttgagggcaaaacagagagtagc
gcactcgcttttgataaagtgcatctgaacagagagtccagtgctccttcaaatggaaag
aaaaagcttgatctacctgtccaaagaaacgtattgacaaattacttctgcttagcatcg
cttgaggcaaaacggaagttcagagcacctaaggttacacctaagcaacaagtacttaat
gggtctttgcccagtcccagaattgaagactctggtacccctgatttaattgaagatact
agcttgccatcaaataacattcaagtttatcagtgtagttctgagcattttagctcagga
acccctctagatgattcaatcaataccgcctctcaatgtagttctgagcgtgtccgctgt
gacatccctcgggatgattcagccagtgtttcaccccagtgttctcatgatattggtagt
gatcctgctgaggacccagacattgaaggcaacaaggtgaaagtcaacttctgcaacaga
agtacaataccgacaggctctttcttagaggggactttgcctgggatatcagatccattt
ttagattcacacaacacagagccatccagagctgcaccacgttatgctgaaaaaagcaat
gtggtctctgccaatagaaatattactgtgaggagttcatatttcaaaacagtaaataaa
agagtttgcacaaatcaaggagaagatgagtgccatgatgaagataactgcgagactggt
aattacactcttcctggagatcaacaaagaagctctggaggtatattgaagagaagaaaa
tttagtgatccccaaaattttgaagatggaatgtttcaacccactagtcctcatgaaagt
ccaccggttgctgataaaggctgtgactctgattcccacgacggtatcaacacaaattct
gaaggaaaatttggatgcaatgtcgcccatgtaaataaatacagtggcattgcagagaaa
tcaatggataagtttgctgcgctgatatcatctttcagatacgcaggctctcgtgccagt
ggtcttcgcgctcctttaaaggatgtgaagaacactcttcctgtcagatctgttctcaga
cctccagaacagagattcggttgtacggctaagaagactactagagtgcctctacaaagc
agattctcaagtgatgctacaaacagcactgacgttcctgatctgagcacatttgcatac
aggcctacaactgcttctgctcattctgatcaggggaagatcacaagcaaagctacagat
gctgctgctggacctcctgacctgagaacatttgcttatgcaccaacaagatctaccacc
agccgttttgatcagagtgaaaacacgcgcaaagctatgtgcactgcggacagccctcct
gatattagcacattcgaatataaacccatgaaaagcgccgtcagacgttcagatgggagc
aagttttcaggtgcagcactaaaagcagctagacgaacctctcggagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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