KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0347200-01
Entry
Os03t0347200-01   CDS       T02163                                 
Symbol
Os03g0347200
Name
(RAP-DB) Armadillo-type fold domain containing protein.
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013  Nucleocytoplasmic transport
dosa03015  mRNA surveillance pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os03t0347200-01 (Os03g0347200)
  09122 Translation
   03013 Nucleocytoplasmic transport
    Os03t0347200-01 (Os03g0347200)
   03015 mRNA surveillance pathway
    Os03t0347200-01 (Os03g0347200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os03t0347200-01 (Os03g0347200)
   03041 Spliceosome [BR:dosa03041]
    Os03t0347200-01 (Os03g0347200)
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     Os03t0347200-01 (Os03g0347200)
Spliceosome [BR:dosa03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    Os03t0347200-01 (Os03g0347200)
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G_like MIF4G DUF5798 DUF5742 RPW8
Other DBs
RAP-DB: Os03t0347200-01
Position
chr03:join(12976220..12976306,12977193..12977252,12977847..12977903,12978609..12978680,12978826..12978888,12979731..12979907,12980279..12980404,12980487..12980553,12980795..12980991,12981784..12981854,12983494..12983578,12983896..12983964,12984739..12984857,12985079..12985217,12985314..12985814,12986069..12986368,12986470..12986651,12987053..12987164,12987729..12987848)
AA seq 867 aa
MSAGWRTLLLRIGDRCPEYGGSADHKEHIETCYGVLCREYEHSKDAMFEFLLQCADQLPH
KIPFFGVLIGLINLENEDFSKGIVDTTHANLQDALHNENRDRIRILLRFLCGLMCSKVVL
PNSIIETFEALLSSAATILDEETGNPSWQPRADFYVYCILASLPWGGSELFEQVPDEFER
VLVGIQSYISIRRHFDDIAFSVFETDEGNSPNKKDFIEDLWERIQVLSRNGWKVKSVPKP
HLSFEAQLVAGVSHRFSPISCPPPTISQSSSEIVKGQEKHEADLKYPQRLRRLHIFPTNK
AENMQPVDRFVVEECILDVLLFFNGCRKECAFYLVSLPVPFRYEYLMAETIFSQLLLLPN
PPFRPIYYTLVIIDLCKALPGAFPSVVVGAVHALFDRISNMDMECRTRLILWFSHHLSNF
QFIWPWQEWAYVKDLPKWAPQRVFVQEVLEREIRLSYFDKIKQSIEDAVELEELLPPKAG
PNFRYHSDEGKESTDGHRLSKELVAMVRGRKTQGDIISWVDEKIIPVNGAKFALDVVSQT
LLDIGSKSFTHLITVLERYGQIISKLCPNEEMQLLLMDEVSAYWKNSTQMIAIAIDRMMG
YRLLSNLAIVKWVFSPANVDQFHVSDRPWEILRNAVSKTYNRIFDLRKEIQTLRKGLQAA
KEASEKAARELEEAKSIIEIVDGQPVPSENPGRLRRLQARADKAKEGEVTTEESLEAKEA
LLARGLEESKELLRLLFKSFVEVLTERLPPISADGDVPNLRAGDPNVNSSARDPEATTME
IDNENGGDNDSQLNGQNKKISHNVGELEQWCLCTLGYLKSFSRQYATEIWSHIAMLDQEI
FVGNIHPLIRKAAFSGLCRPTSEGSHL
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgagcgcgggctggaggacgctgctgctgcggatcggcgacaggtgcccggagtacggg
ggctccgccgaccacaaggagcacatcgaaacttgttatggtgtgctttgtcgagaatac
gaacactccaaagatgcaatgtttgagtttctcctccaatgtgcagatcaattgcctcac
aagattcctttctttggagtattgataggtttgataaacttggaaaatgaagatttttcc
aagggtattgtcgatacaacacatgccaatttacaggatgccttgcataatgaaaatcgt
gacagaatcaggatattgctgcgatttctctgtggcctgatgtgcagcaaagttgtcctg
ccaaattctattattgaaacatttgaggcactattatcatctgctgcaacaatattagat
gaggaaaccggaaatccttcgtggcaaccacgtgctgatttctatgtttattgtatcttg
gcttcccttccatggggtggctcagaattgtttgagcaagttccagatgaatttgagaga
gttctggttggtatacagtcttatataagcattagaaggcattttgatgatattgctttc
tcagtctttgaaacagatgaaggcaactctcccaacaaaaaggatttcatcgaagattta
tgggagcgtattcaagttctttctcgcaatgggtggaaggttaagagtgttccaaaacct
cacctgtcgtttgaagctcagctggtagctggagtttctcaccgtttctccccaattagt
tgccccccacctactatctcgcaatcatcttctgaaatagtaaaaggtcaagaaaagcat
gaagctgatctgaagtatcctcaaaggcttcgtaggcttcacatatttccaacaaataaa
gctgagaacatgcaacctgtagatcgttttgttgttgaagaatgcatattggatgtgcta
cttttcttcaatggatgtcgcaaagaatgtgcattttatctggtcagcttacctgtgcct
ttccgttatgaatacctgatggctgagaccatattttcacagctactgttattgccgaat
ccccctttcaggccaatttactataccttggttattatcgacctttgcaaggcattgcca
ggtgcatttccttcagttgtggtaggagcagtacatgctctttttgacagaattagcaac
atggatatggagtgccgcacccgacttatcctatggttttcacatcacttgtcaaatttt
cagttcatttggccttggcaggagtgggcttacgtcaaggaccttccaaaatgggctcca
cagcgtgtttttgtccaagaagtattagaaagggaaattcgcttgtcctactttgacaaa
attaagcagagcatagaggatgctgttgaattggaagaactgttacccccaaaagctggg
cctaacttcagatatcatagtgatgaaggcaaagaaagcactgatggccacagactctcc
aaggaacttgttgccatggttagaggaaggaagacacaaggtgatattatttcatgggta
gacgaaaaaataattcctgtaaatggtgccaaatttgcacttgatgtagttagccagaca
cttctggacattggctcaaaaagtttcacccatcttatcactgttttggagagatatggt
caaataatatcaaagctgtgcccgaatgaagaaatgcagttattgttgatggatgaagtc
agtgcttattggaagaacagtacccagatgattgccatagctattgataggatgatgggt
tatcgcctactttccaatctggctatagtcaaatgggttttttctcctgctaatgttgat
caatttcatgtttcagatcgtccatgggagattcttagaaatgctgttagtaaaacatac
aatcggatttttgacctccggaaagaaattcagacactcaggaaaggtcttcaagctgct
aaagaggccagtgaaaaggccgccagagagttggaggaggctaaatctattattgagatt
gtagatggccaacctgtgccatctgaaaatccaggaaggctaagacgacttcaagcgcgt
gctgacaaagcgaaagaaggagaagtaaccactgaagaatctttagaagcaaaggaggcc
ctccttgctcgagggcttgaagaaagcaaggaattgcttaggttactattcaagagcttt
gttgaagtgctaactgaacgtttgccacctatttctgctgatggagatgttcctaattta
cgtgctggagacccgaatgtaaattcttcagcccgtgaccctgaagcaacaaccatggaa
atagacaatgaaaatggaggagataacgatagtcagctgaatggtcaaaacaagaaaatc
agtcacaatgttggagagcttgagcaatggtgtctctgcacattgggctatctcaagtcg
ttttctcgtcaatatgctactgagatctggtcccatattgccatgttggatcaggagatt
ttcgttgggaatattcaccctcttatccggaaagctgctttctccggtttgtgcagacct
accagtgaagggtctcacctttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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