KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0402100-01
Entry
Os04t0402100-01   CDS       T02163                                 
Symbol
Os04g0402100
Name
(RAP-DB) Similar to Calnexin (Fragment).
  KO
K08054  calnexin
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04141  Protein processing in endoplasmic reticulum
dosa04145  Phagosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    Os04t0402100-01 (Os04g0402100)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    Os04t0402100-01 (Os04g0402100)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:dosa03110]
    Os04t0402100-01 (Os04g0402100)
   04131 Membrane trafficking [BR:dosa04131]
    Os04t0402100-01 (Os04g0402100)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:dosa04091]
    Os04t0402100-01 (Os04g0402100)
Chaperones and folding catalysts [BR:dosa03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   Os04t0402100-01 (Os04g0402100)
Membrane trafficking [BR:dosa04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    Os04t0402100-01 (Os04g0402100)
Lectins [BR:dosa04091]
 Calnexin / calreticulin
  Os04t0402100-01 (Os04g0402100)
SSDB
Motif
Pfam: Calreticulin
Other DBs
RAP-DB: Os04t0402100-01
Position
chr04:complement(join(19916568..19916642,19916382..19916451,19914307..19915436,19914124..19914195,19913891..19914007,19913651..19913800))
AA seq 537 aa
MVGGRALLPLLLLSALLVQIRASDPLFYEPFDESFEGRWVLSGKDDYKGVWKHEKSDGHE
DYGLLVSEKAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWD
AKEFDNETPYTIMFGPDKCGSTNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYT
AILKPDNEVRILVDGEEKKKANFLSADDFEPSLIPSKTIPDPDDKKPEDWDERAKIPDPD
AVKPDDWDEDAPMEIEDEEATKPEGWLDDEPEEIDDPEANKPEDWDDEEDGEWEAPKIDN
PKCEEAPGCGEWKRPMKQNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDSDP
IAAIGIEIWTMQDGILFDNILIADDEKVATSILEKSWKPKYEVEKEKEKAEEAAAAAGDG
LSEFQKKIFDVLYKLADIPFLEPYKTKIIDVIEKGEKQPNITIGILVSIVVVFVTVLFRI
LFGGKKPAAPVKPVAEVKKPKSTESEAAGSSGGKEDEKEEEEKDGAAAPRRRSRRET
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggtgggtgggcgcgcgctcctgccgctgcttctgctctccgcgctgctcgtccagatc
cgcgcctccgatccgctgttctatgagccgttcgacgagagcttcgaggggaggtgggtt
ctctccgggaaggacgactacaaaggtgtatggaagcacgaaaagagtgatggacatgaa
gactatggcctgcttgttagtgagaaggccaagaaatatgccataatcaaggagcttgat
gagcctgttactttgaaggatgggactgttgtcctgcagtttgaagtgaggcttcagaat
ggccttgagtgtggaggtgcatatcttaagtacattcgtcctcaggatgctgcatgggat
gccaaggagtttgataatgagactccttacactattatgtttggtcctgacaaatgtgga
tcaactaacaaggtgcatttcatccttaagcacaagaaccccaagactggcaagtatgtt
gaacaccacctcaagttcccaccttctgtcccatatgataagctctctcatgtctacacg
gctatcttgaagcctgataatgaggtgagaattttggttgatggggaagagaagaagaag
gcaaacttcctttctgctgatgattttgagccatcacttatcccatccaagaccattcct
gatcctgatgacaaaaagccagaagactgggatgagagagctaaaatccctgatccagat
gctgtgaagcctgatgactgggatgaggatgcccccatggaaattgaggacgaagaggcc
acaaagccagaggggtggctggatgatgagccagaggaaattgatgatccggaggctaac
aagcctgaagactgggatgatgaggaggatggagaatgggaagcaccaaagattgacaac
cccaagtgtgaagaggctcctggttgtggtgagtggaagaggccgatgaagcagaaccct
gcttacaagggcaagtggcatgcgcctcttatcgacaaccccaactacaaaggaatctgg
aagccccaagagatccccaaccctgagtacttcgagcttgacaagcctgactctgatccg
attgccgctattgggattgagatctggacgatgcaagatggcatcctgtttgacaacatt
ttgatcgctgatgatgagaaggttgccacttctatcctggagaagtcttggaagcccaag
tacgaagtagagaaggagaaggagaaggctgaggaggcagcagcggcagcaggtgatggt
ctttctgagttccagaagaagatctttgacgttctgtacaaactcgctgacattccattc
ttggaaccctacaagactaagatcattgatgtaattgagaagggagagaagcagcccaac
atcaccattggaattctggtctccatcgttgtcgtctttgtgactgtgctcttcaggatc
ctgttcggcggcaagaagccagcggctcctgtgaagcccgtagccgaggtcaaaaaacca
aagtctaccgagtccgaagcagctggaagcagcggtggcaaggaggacgagaaggaagag
gaagagaaggatggagctgctgccccacgccggaggtcccgaagggagacatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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