KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0219800-01
Entry
Os05t0219800-01   CDS       T02163                                 
Symbol
Os05g0219800
Name
(RAP-DB) DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site domain containing protein.
  KO
K11273  chromosome transmission fidelity protein 1 [EC:5.6.2.7]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os05t0219800-01 (Os05g0219800)
Enzymes [BR:dosa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Os05t0219800-01 (Os05g0219800)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    Os05t0219800-01 (Os05g0219800)
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 ResIII DEAD AAA
Other DBs
RAP-DB: Os05t0219800-01
Position
chr05:complement(join(7374398..7374481,7374237..7374372,7373612..7374163,7373444..7373526,7372379..7372732,7371589..7371843,7371275..7371517,7370962..7371183,7369898..7370462,7369593..7369798))
AA seq 899 aa
GTRPRRRDADGRERGKNPKPHHHQRARAPPPPPRRDFPAFPFAPYPIQSEFMSFLYGALS
SGPGALALLESPTGTGKTLSIICSALQWLVDHRDAAARGSTTAAAAGGGGEGDGDEPDWM
RDFTPLPPEKPTAKKGRPPAAAARSKAPRRAAAGSEKPEGSEEAEDEEFLVEEYESDGEV
CVRREAGKRPHRGGGSSSESEADGEEEEEEEVTPKVFFTSRTHSQLSQFVGELKKTEFGW
RLRTVCLGSRKNLCINKDVLKLGSANRINERCLELQKSKKSSKTKVEGDNRKVCQSKTSC
GCPMIRKRGLQKEFKSEVSEQGALDIEDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQS
LLLKSARESLGLNLKNSVVIIDEAHNLADSLTSMYNSKITSSQLNAILSHLEAYLNRFQS
VLGAGNRRYIQTLTVLTRSFLRVLTSNQDDACTMTSMTINQFLFSLDIDNINIVKLCQYV
KESNIIHKVSGYANKLNINQDGVNHLSHQQQYDEGSSIASFQTLADFLRSLLNCNDNGRI
IVARKKFSGQPEDAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPP
SDIKFFTCNHIVPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPE
GVVMFFASYEYERFVYDAWAASGMISKISKKKHVFREPKNSVDVEMTLNKYKEAIQSCSK
SSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTETIKYIENIS
KPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSIGRAIRHAND
YAAMLLVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACAQNYGEVHRLLHQFFKLNRQTH
NT seq 2700 nt   +upstreamnt  +downstreamnt
ggcactcgtccccgtcgccgagacgccgacggccgcgagcgcgggaaaaatcccaaaccc
caccaccaccagcgcgcgcgcgcgcctccgccgccgccgcggcgggacttcccggcgttc
ccgttcgcgccgtacccgatccagtcggagttcatgtccttcctctacggcgccctctcc
tccggccccggcgcgctcgccctcctcgagagccccaccggcaccgggaagaccctcagc
atcatctgcagcgcgctccagtggctggtcgaccaccgcgacgccgccgcacggggctcg
accaccgccgccgcagccggcggcggtggggaaggagacggcgacgagcctgactggatg
cgggacttcacgccactgccgccggagaagccgaccgcgaagaaggggaggccccccgcc
gcagcggcgcggagcaaggcgccgaggagggcggcggcgggttcggagaaaccggagggg
tctgaggaggcggaggacgaggagttcttggttgaggagtacgagagcgacggcgaggtc
tgcgtgaggcgggaggcggggaagcggccgcatcgcggtggtggtagcagtagcgagagc
gaggcggatggggaggaagaggaggaggaggaggtgacacccaaggtgttcttcactagc
cgcactcactcacagctctctcagtttgtaggagagctcaagaagacggaattcggatgg
cggctcaggacggtgtgcttgggatccaggaagaacttgtgcatcaacaaggatgttctg
aagctggggagcgcaaaccggatcaatgagaggtgcctggagctgcagaagagtaagaag
agcagcaaaactaaggtagagggtgacaacagaaaggtgtgccaatcaaagacctcttgt
gggtgcccaatgataagaaagaggggtcttcagaaagaattcaaaagtgaagtgtcagag
caaggtgcattggacattgaggatctagcgcaattaggaaagaagattggaacatgtccc
tactacggtgcacgtgatatggtccgcacagctgacctagttgtccttccttaccagtct
ttattgctgaagtctgctagagaatcgcttggccttaatctgaagaacagcgttgtcata
atagatgaggctcacaatttagcagattccctcactagcatgtacaactcaaagatcaca
tcttctcagctgaatgcaattctttcccacctggaggcatatctcaatagatttcagagt
gttctgggagctggaaatcgacggtacatccaaacattgactgttttaacacggtcattt
ctacgagttctgacaagcaaccaagatgatgcctgcactatgacttctatgactataaac
cagttcttgttctcccttgatatcgacaacataaatatagtaaagctttgccagtatgtg
aaggaaagcaatataattcacaaggtaagtggatatgcgaacaaattgaacatcaatcaa
gatggtgtgaatcatttaagtcaccagcagcaatatgatgaaggaagcagtatagcaagc
tttcagacattggctgattttttgcgctccctattaaactgcaatgataatggaagaatc
atagttgcaaggaaaaagttcagtggacaacctgaagatgcttatcttaaatttgtgatg
ctttgcgcagagaaaatctttttggagattacatgtgatgcatatgctgttattctggct
ggtggtaccctccagcctatagaagaaacaaggctacgcttgtttccaaacttacctcct
tctgatataaaattcttcacatgcaaccatatcgttcctccagagagtattcttcctata
gctgttacacgtgggccatcaggcaaggcatttgatttcagctacagttcaaggagttct
cacaccatgattgaagagcttggtcgctttctttgcaatgtagtgacgacagtgcctgaa
ggagtggtcatgttttttgcttcctatgaatatgaaagatttgtttatgatgcatgggca
gcttcaggcatgatttccaagatttctaagaagaaacatgtcttcagagagcctaaaaac
agtgttgatgtcgaaatgacgctcaacaaatacaaggaggcaattcaatcctgtagcaag
agttcgcaagatacaggagtcactggggcacttctattggctgttgttggtgggaaaatt
tctgaaggcataaacttcagtgatgggatgggccgttgtgttgtaatggttggattgcct
tatccaagtccatctgatgtggagctgaccgagaccataaagtatatagaaaatatttct
aaaccagttttggttgggggtgataattcctcaagcagcaaatatgatgatgaatgcaaa
cttcagcctggctttgatatattaagaaagtgcaacaaaggtggacgagagtactatgag
aacttatgcatgaaagctgtgaatcaatctattggaagagcaatcagacatgcaaatgat
tatgctgcaatgctattggttgactcacgttatgcccatacttcatcaaacaggagttcc
tcttcccctactgacaaactaccccaatggataaaaacacgacttgcttgtgctcaaaat
tatggagaggttcatagattgttgcaccagttcttcaaactcaacaggcaaacgcattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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