KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os06t0175800-01
Entry
Os06t0175800-01   CDS       T02163                                 
Symbol
Os06g0175800
Name
(RAP-DB) Similar to Cystathionine beta-lyase, chloroplast precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase).
  KO
K01760  cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00270  Cysteine and methionine metabolism
dosa00450  Selenocompound metabolism
dosa01100  Metabolic pathways
dosa01110  Biosynthesis of secondary metabolites
dosa01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Os06t0175800-01 (Os06g0175800)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Os06t0175800-01 (Os06g0175800)
Enzymes [BR:dosa01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.13  cysteine-S-conjugate beta-lyase
     Os06t0175800-01 (Os06g0175800)
SSDB
Motif
Pfam: Cys_Met_Meta_PP Aminotran_5 Beta_elim_lyase Aminotran_1_2 GDC-P
Other DBs
RAP-DB: Os06t0175800-01
Position
chr06:join(3823059..3823326,3823416..3823528,3824681..3824751,3824839..3824930,3825032..3825119,3825216..3825327,3825455..3825551,3825662..3825743,3826108..3826225,3826411..3826518,3826669..3826771,3826948..3827123)
AA seq 475 aa
MSAAAAAAAAAAIPTSLGRLFHLRPTPNPSRNLSGSSAQPLLRLSYHPRLTLSRRMEAPA
AIADSHGGGDLSASAVGAEALGAVAAPDFDVEMKEPSVATILTSFENSFDGFGSMSTPLY
QTATFKQPSATDNGPYDYTRSGNPTRDVLQSLMAKLEKADQAFCFTSGMAALAAVTHLLK
SGQEIVAGEDIYGGSDRLLSQVAPRHGIVVKRIDTTKISEVTSAIGPLTKLVWLESPTNP
RLQITDIKKIAEIAHYHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDLMAG
ILAVKGESLAKEIAFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQANAQKIAEFLASH
PRVKKVNYAGLPDHPGRSLHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFNVTVSFGSV
KSLISLPCFMSHASIPSAVREERGLTDDLVRISVGIEDADDLIADLDHALRSGPA
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcgccgccgccgccgccgccgccgccgccgcaatccccacctctctcggccgcctc
ttccacctccgccccaccccgaacccctcccggaaccttagcggcagctcagcgcaaccc
ctcctccgcctcagctaccacccacgcctcacgctctctcgccgcatggaggcgccggcg
gcgatcgccgactcccacggcggcggcgacctgagcgcgtccgcggtcggcgcggaggcg
ctgggcgccgtcgccgctccggatttcgatgtggagatgaaggagcctagcgtggcgacg
atactgacgagcttcgagaactcgttcgatgggttcgggtctatgagcacgccgctgtac
cagacggccacgtttaagcagccttcagcaaccgataatggaccttatgattacactaga
agtggtaaccctacacgtgatgttctccaaagccttatggctaagcttgagaaggcggat
caggcattctgcttcaccagtgggatggcagcactagctgcagtaacacacctccttaag
tctggacaagaaatagttgctggagaggacatatatggtggctcagaccgtctgctctca
caagttgccccgagacatgggattgtagtaaaacgaattgatacaaccaaaattagtgag
gtaacttctgcaattgggcccttgactaaactagtatggcttgaaagtcccaccaatccc
cgtctacaaattactgatataaagaaaatagcagagatagctcattaccatggtgctctt
gttttagtagacaacagcatcatgtctcctgtgctctcccgtcctctagaacttggagca
gatattgttatgcactcagcaaccaaatttatagctggacatagcgatcttatggctgga
attcttgcggtgaagggtgaaagcttggctaaagagattgcatttctacaaaatgctgaa
ggatcaggtttggcaccatttgattgctggctttgtttgagaggaatcaaaaccatggct
ttgcgggtggagaagcagcaggctaatgctcagaagattgctgaatttctagcttctcat
ccaagagtaaagaaagtgaactatgcaggacttcctgatcatcctggacgatctctacac
tattcccaggcaaagggagcgggttcagttctcagtttcctaactggttcattagctctc
tcaaaacatgttgttgagaccacaaagtacttcaatgtaacagttagctttggaagtgtg
aaatcgctcattagcctgccatgcttcatgtcacacgccagcatcccttctgcggttcgc
gaggagcgcggcctgacagacgatctagtcaggatatcggttggaattgaggatgccgac
gacctcatagcggatcttgatcatgctctccggtctggtccagcttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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